Evidence map›Paper›PMID 18505842›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

Insights into the stator assembly of the Vibrio flagellar motor from the crystal structure of MotY.

Seiji Kojima, Akari Shinohara, Hiroyuki Terashima, Toshiharu Yakushi, Mayuko Sakuma, Michio Homma, Keiichi Namba, Katsumi Imada

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 71 citations in OpenAlex.

  1. Journal of bacteriology · 2026
    Review
  2. Article
  3. The last bacterial common ancestor encoded a complex flagellum.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Article
  6. The Vibrio Polar Flagellum: Structure and Regulation.Advances in experimental medicine and biology · 2023
    Article
  7. Review
  8. Putative Spanner Function of theJournal of bacteriology · 2021
    Article
  9. Article
  10. Review
  11. Review
  12. Journal of bacteriology · 2020
    Article
  13. Molecular architecture of the sheathed polar flagellum inProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. Review
  15. Article
  16. Article
  17. Conformational change in the periplamic region of the flagellar stator coupled with the assembly around the rotor.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Seiji KojimaDivision of Biological Science, Graduate School of Science, Nagoya University, Chikusa-Ku, Nagoya 464-8602, Japan.
Akari Shinohara
Hiroyuki Terashima
Toshiharu Yakushi
Mayuko Sakuma
Michio Homma
Keiichi Namba
Katsumi Imada
Japan Science and Technology Agency · JPNagoya University · JPOsaka University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rotation of the sodium-driven polar flagellum of Vibrio alginolyticus requires four motor proteins: PomA, PomB, MotX, and MotY. PomA and PomB form a sodium-ion channel in the cytoplasmic membrane that functions as a stator complex to couple sodium-ion flux with torque generation. MotX and MotY are components of the T-ring, which is located beneath the P-ring of the polar flagellar basal body and is involved in incorporation of the PomA/PomB complex into the motor. Here, we describe the determination of the crystal structure of MotY at 2.9 A resolution. The structure shows two distinct domains: an N-terminal domain (MotY-N) and a C-terminal domain (MotY-C). MotY-N has a unique structure. MotY-C contains a putative peptidoglycan-binding motif that is remarkably similar to those of peptidoglycan-binding proteins, such as Pal and RmpM, but this region is disordered in MotY. Motility assay of cells producing either of the MotY-N and MotY-C fragments and subsequent biochemical analyses indicate that MotY-N is essential for association of the stator units around the rotor, whereas MotY-C stabilizes the association by binding to the peptidoglycan layer. Based on these observations, we propose a model for the mechanism of stator assembly around the rotor.

Indexed as

Amino Acid SequenceBacterial Outer Membrane ProteinsBinding SitesCrystallography, X-RayFlagellaMolecular Sequence DataPeptidoglycanProtein Structure, TertiaryVibrio alginolyticusBacterial Outer Membrane ProteinsMotY protein, VibrioPeptidoglycan

Identifiers

PMID18505842
PMCPMC2409386
OpenAlexW2008122645

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.