Evidence map›Paper›PMID 18502697›Full record

ArticleGene expression patterns : GEP2008

Differential expression of the HMGN family of chromatin proteins during ocular development.

Michelle M Lucey, Yan Wang, Michael Bustin, Melinda K Duncan

Open access · greenAbstract read
In one paragraph

Article in Gene expression patterns : GEP, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Biological Functions of HMGN Chromosomal Proteins.International journal of molecular sciences · 2020
    Review
  9. Article
  10. Article
  11. Ocular surface development and gene expression.Journal of ophthalmology · 2013
    Article
  12. Article
  13. Review
  14. Article
  15. Developmental function of HMGN proteins.Biochimica et biophysica acta
    Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Michelle M LuceyDepartment of Biological Sciences, University of Delaware, 327 Wolf Hall, Newark, DE 19716, USA.
Yan WangDepartment of Biological Sciences, University of Delaware, 327 Wolf Hall, Newark, DE 19716, USA.
Michael BustinProtein Section, Laboratory of Metabolism, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Melinda K DuncanDepartment of Biological Sciences, University of Delaware, 327 Wolf Hall, Newark, DE 19716, USA.
University of Delaware · USNational Institutes of Health · US

Funding

VOLUMETRIC BREAST DENSITY ESTIMATION USING BREAST SURFACE RECONSTRUCTEDP20RR016472 · NCRR · UNIVERSITY OF DELAWARE · PI STANHOPE, STEVEN J. · 2001 to 2011
$37.6M
Biological Functions of Chromosomal ProteinsZIABC011154 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI BUSTIN, MICHAEL · 2009 to 2023
$11.0M
The Regulation of Lens Fiber Cell DifferentiationR01EY012221 · NEI · UNIVERSITY OF DELAWARE · PI DUNCAN, MELINDA K · 1998 to 2012
$3.7M
Chromosomal Proteins and FunctionsZ01BC004496 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI BUSTIN, MICHAEL · 1997 to 2008
$3.0M
Intramural NIH HHS Z01 BC004496NCRR NIH HHS P20 RR016472NCRR NIH HHS P20 RR16472NEI NIH HHS EY012221NEI NIH HHS R01 EY012221
6 · The paper itself

Abstract

The HMGN proteins are a group of non-histone nuclear proteins that associate with the core nucleosome and alter the structure of the chromatin fiber. We investigated the distribution of the three best characterized HMGN family members, HMGN1, HMGN2 and HMGN3 during mouse eye development. HMGN1 protein is evenly distributed in all ocular structures of 10.5 days post-coitum (dpc) mouse embryos however, by 13.5dpc, relatively less HMGN1 is detected in the newly formed lens fiber cells compared to other cell types. In the adult, HMGN1 is detected throughout the retina and lens, although in the cornea, HMGN1 protein is predominately located in the epithelium. HMGN2 is also abundant in all ocular structures of mouse embryos, however, unlike HMGN1, intense immunolabeling is maintained in the lens fiber cells at 13.5dpc. In the adult eye, HMGN2 protein is still found in all lens nuclei while in the cornea, HMGN2 protein is mostly restricted to the epithelium. In contrast, the first detection of HMGN3 in the eye is in the presumptive corneal epithelium and lens fiber cells at 13.5dpc. In the lens, HMGN3 remained lens fiber cell preferred into adulthood. In the cornea, HMGN3 is transiently upregulated in the stroma and endothelium at birth while its expression is restricted to the corneal epithelium in adulthood. In the retina, HMGN3 upregulates around 2 weeks of age and is found at relatively high levels in the inner nuclear and ganglion cell layers of the adult retina. RT-PCR analysis determined that the predominant HMGN3 splice form found in ocular tissues is HMGN3b which lacks the chromatin unfolding domain although HMGN3a mRNA is also detected. These results demonstrate that the HMGN class of chromatin proteins has a dynamic expression pattern in the developing eye.

Indexed as

AnimalsEyeGene Expression Regulation, DevelopmentalHMGN1 ProteinHMGN2 ProteinHMGN ProteinsMiceMice, Inbred C57BLRNA, MessengerHMGN1 ProteinHMGN2 ProteinHMGN3 protein, mouseHMGN ProteinsRNA, Messenger

Identifiers

PMID18502697
PMCPMC2525792
OpenAlexW1990181499

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.