Evidence map›Paper›PMID 18500726›Full record

ArticleJournal of cellular biochemistry2008

Locus control region mediated regulation of adult beta-globin gene expression.

Shermi Liang, Babak Moghimi, Thomas P Yang, John Strouboulis, Jörg Bungert

Abstract read
In one paragraph

Article in Journal of cellular biochemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 33 citations in OpenAlex.

  1. Erythropoiesis: insights from a genomic perspective.Experimental & molecular medicine · 2024
    Review
  2. Review
  3. Development and clinical translation ofComputational and structural biotechnology journal · 2022
    Review
  4. Review
  5. Review
  6. Article
  7. DNA·RNA triple helix formation can function as aProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Shermi LiangDepartment of Biochemistry and Molecular Biology, College of Medicine, University of Florida, Center for Mammalian Genetics, Genetics Institute, Shands Cancer Center, Gainesville, Florida 32610, USA.
Babak Moghimi
Thomas P Yang
John Strouboulis
Jörg Bungert
University of Florida · USAlexander Fleming Biomedical Sciences Research Center · GR

Funding

STRUCTURE/FUNCTION OF THE HUMAN B-GLOBIN LCRR01DK052356 · NIDDK · UNIVERSITY OF FLORIDA · PI BUNGERT, JORG · 1997 to 2017
$4.7M
NIDDK NIH HHS DK 52356NIDDK NIH HHS R01 DK052356
6 · The paper itself

Abstract

Many genes residing in gene clusters and expressed in a differentiation or developmental-stage specific manner are regulated by locus control regions (LCRs). These complex genetic regulatory elements are often composed of several DNAse I hypersensitive sites (HS sites) that function together to regulate the expression of several cis-linked genes. Particularly well characterized is the LCR associated with the beta-globin gene locus. The beta-globin LCR consists of five HS sites that are located upstream of the beta-like globin genes. Recent data demonstrate that the LCR is required for the association of the beta-globin gene locus with transcription foci or factories. The observation that RNA polymerase II associates with the LCR in erythroid progenitor or hematopoietic stem cells which do not express the globin genes suggests that the LCR is always in an accessible chromatin configuration during differentiation of erythroid cells. We propose that erythroid specific factors together with ubiquitous proteins mediate a change in chromatin configuration that juxtaposes the globin genes and the LCR. The proximity then facilitates the transfer of activities from the LCR to the globin genes. In this article we will discuss recent observations regarding beta-globin locus activation with a particular emphasis on LCR mediated activation of adult beta-globin gene expression.

Indexed as

Locus Control RegionAgingAnimalsGene Expression RegulationGlobinsHumansModels, GeneticTrans-ActivatorsGlobinsTrans-Activators

Identifiers

PMID18500726
PMCPMC2696286
OpenAlexW2033539448

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.