SynthesisAntonie van Leeuwenhoek2008
An assessment of actinobacterial diversity in the marine environment.
Synthesis in Antonie van Leeuwenhoek, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
23 citing papers in PubMed.
- Existence of rare actinobacterial forms in the Indian sector of Southern Ocean: 16 S rRNA based metabarcoding study.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024Article
- iChip-Inspired Isolation, Bioactivities and Dereplication ofMicroorganisms · 2022Article
- Assembly of Natively Synthesized Dual Chromophores Into Functional Actinorhodopsin.Frontiers in microbiology · 2021Article
- Diversity and Distribution of Uncultured and Cultured Gaiellales and Rubrobacterales in South China Sea Sediments.Frontiers in microbiology · 2021Article
- A Phylogenomic and Molecular Markers Based Analysis of the ClassFrontiers in microbiology · 2018Article
- The Madeira Archipelago As a Significant Source of Marine-Derived Actinomycete Diversity with Anticancer and Antimicrobial Potential.Frontiers in microbiology · 2016Article
- Distinct Spatial Patterns of SAR11, SAR86, and Actinobacteria Diversity along a Transect in the Ultra-oligotrophic South Pacific Ocean.Frontiers in microbiology · 2016Article
- Diversity, Biogeography, and Biodegradation Potential of Actinobacteria in the Deep-Sea Sediments along the Southwest Indian Ridge.Frontiers in microbiology · 2016Article
- Genomes of planktonic Acidimicrobiales: widening horizons for marine Actinobacteria by metagenomics.mBio · 2015Article
- Expanding the World of Marine Bacterial and Archaeal Clades.Frontiers in microbiology · 2015Article
- Exploring the diversity and metabolic potential of actinomycetes from temperate marine sediments from Newfoundland, Canada.Journal of industrial microbiology & biotechnology · 2015Article
- Effect of photosynthetic bacteria on water quality and microbiota in grass carp culture.World journal of microbiology & biotechnology · 2014Article
- Bioprospecting from marine sediments of New Brunswick, Canada: exploring the relationship between total bacterial diversity and actinobacteria diversity.Marine drugs · 2014Article
- Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone.The ISME journal · 2014Article
- Bacillus subtilis SC02 supplementation causes alterations of the microbial diversity in grass carp water.World journal of microbiology & biotechnology · 2013Article
- Targeted search for actinomycetes from nearshore and deep-sea marine sediments.FEMS microbiology ecology · 2013Article
- Influence of nutrients and currents on the genomic composition of microbes across an upwelling mosaic.The ISME journal · 2012Article
- Genome sequence of "Candidatus Aquiluna" sp. strain IMCC13023, a marine member of the Actinobacteria isolated from an arctic fjord.Journal of bacteriology · 2012Article
- Comparative genomics reveals evidence of marine adaptation in Salinispora species.BMC genomics · 2012Article
- Genetic screening strategy for rapid access to polyether ionophore producers and products in actinomycetes.Applied and environmental microbiology · 2011Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors.
Funding
Abstract
The 16S rRNA gene sequence diversity within the Phylum Actinobacteria was assessed from four sources: PCR-generated V6 sequence tags derived from seawater samples, metagenomic data from the Global Ocean Sampling (GOS) expedition, marine-derived sequences maintained in the Ribosomal Database Project (RDP), and select cultured strains for which sequence data is not yet available in the RDP. This meta-analysis revealed remarkable levels of phylogenetic diversity and confirms the existence of major, deeply rooted, and as of yet uncharacterized lineages within the phylum. A dramatic incongruence among cultured strains and those detected using culture-independent techniques was also revealed. Redundancy among the actinobacteria detected using culture-independent techniques suggests that greater sequence coverage or improved DNA extraction efficiencies may be required to detect the rare phylotypes that can be readily cultured from marine samples. Conversely, new strategies need to be developed for the cultivation of frequently observed but yet to be cultured marine actinobacteria.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.