Evidence map›Paper›PMID 18500556›Full record

ArticleApoptosis : an international journal on programmed cell death2008

Identification and characterization of the human inhibitor of caspase-activated DNase gene promoter.

Kazuhiko Omata, Ryosuke Suzuki, Takahiro Masaki, Tatsuo Miyamura, Tazuko Satoh, Tetsuro Suzuki

Open access · hybridAbstract read
In one paragraph

Article in Apoptosis : an international journal on programmed cell death, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Analysis of Differentially Expressed Proteins inBioMed research international · 2017
    Article
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  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Kazuhiko OmataDepartment of Virology II, National Institute of Infectious Diseases, 1-23-1 Toyama, Shinjuku-ku, Tokyo, Japan.
Ryosuke Suzuki
Takahiro Masaki
Tatsuo Miyamura
Tazuko Satoh
Tetsuro Suzuki
National Institute of Infectious Diseases · JPNippon Dental University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA fragmentation factor is a heterodimer complex of the nuclease CAD and its specific inhibitor ICAD, which can be activated during apoptosis to induce DNA fragmentation. Although ICAD expression levels have been quantified in a variety of human cancer cells, the mechanism of ICAD gene regulation remains unknown. In this study, we identified a 106-bp TATA-less region upstream of the transcription start site as a basal promoter of the human ICAD gene. An E-Box motif, which binds transcription factors of the basic helix-loop-helix/leucine zipper family, is responsible for transcriptional activity, as demonstrated using mutated promoter-reporters. A chromatin immunoprecipitation assay further demonstrated that Myc binds to an endogenous ICAD promoter. The functional importance of Myc in the regulation of ICAD transcription was also demonstrated by knock-down of c-Myc and N-Myc gene expression, as well as their ectopic expression. Structural analysis of the human ICAD promoter and identification of factors which regulate its activity might further our understanding of the biological role of ICAD with respect to regulation of apoptosis and cancer development.

Indexed as

Promoter Regions, GeneticApoptosisApoptosis Regulatory ProteinsBase SequenceBinding SitesCell Line, TumorCloning, MolecularDeoxyribonucleasesDNA, NeoplasmDNA PrimersGene ExpressionGenes, mycHumansMolecular Sequence DataProto-Oncogene Proteins c-mycTranscription Initiation SiteApoptosis Regulatory Proteinscaspase-activated DNase inhibitorDeoxyribonucleasesDNA, NeoplasmDNA PrimersMYC protein, humanProto-Oncogene Proteins c-mycUpstream Stimulatory Factors

Identifiers

PMID18500556
PMCPMC2423419
OpenAlexW1977256563

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.