Evidence map›Paper›PMID 18499701›Full record

ArticleCarcinogenesis2008

Epigenetic repression of the estrogen-regulated Homeobox B13 gene in breast cancer.

Benjamin A T Rodriguez, Alfred S L Cheng, Pearlly S Yan, Dustin Potter, Francisco J Agosto-Perez, Charles L Shapiro, Tim H-M Huang

Open access · bronzeAbstract read
In one paragraph

Article in Carcinogenesis, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 2 pooled it
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 2 syntheses or guidelines pooled it, 45 citations in OpenAlex.

  1. Pooled it
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  9. Computational prognostic indicators for breast cancer.Cancer management and research · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Benjamin A T RodriguezHuman Cancer Genetics Program, The Ohio State University, Columbus, OH 43210, USA.
Alfred S L Cheng
Pearlly S Yan
Dustin Potter
Francisco J Agosto-Perez
Charles L Shapiro
Tim H-M Huang
Cancer Genetics (United States) · USThe Ohio State University · USChinese University of Hong Kong · CNU-M Rogel Cancer Center

Funding

DNA Hypermethylation in Breast CancerR01CA069065 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HUANG, TIM H.-M. · 2002 to 2011
$2.4M
NCI NIH HHS R01 CA069065NCI NIH HHS R01 CA 69065NCI NIH HHS U54 CA11300
6 · The paper itself

Abstract

Several studies have reported that a high expression ratio of HOXB13 to IL17BR predicts tumor recurrence in node-negative, estrogen receptor (ER) alpha-positive breast cancer patients treated with tamoxifen. The molecular mechanisms underlying this dysregulation of gene expression remain to be explored. Our epigenetic analysis has found that increased promoter methylation of one of these genes, HOXB13, correlate with the decreased expression of its transcript in breast cancer cell lines (P < 0.005). Transcriptional silencing of this gene can be reversed by a demethylation treatment. HOXB13 is suppressed by the activation of estrogen signaling in ERalpha-positive breast cancer cells. However, treatment with 4-hydroxytamoxifen (4-OHT), an antiestrogen, abrogates the ERalpha-mediated suppression in cancer cells. The notion that this transcriptional induction of HOXB13 occurs in vitro with simultaneous exposure to both estrogen and 4-OHT may provide a biological explanation for its aberrant expression in many node-negative patients undergoing tamoxifen therapy. Interestingly, promoter hypermethylation of HOXB13 is more frequently observed in ERalpha-positive patients with increased lymph node metastasis (P = 0.031) and large tumor sizes (>5 cm) (P = 0.008). In addition, this aberrant epigenetic event is associated with shorter disease-free survival (P = 0.029) in cancer patients. These results suggest that hypermethylation of HOXB13 is a late event of breast tumorigenesis and a poor prognostic indicator of node-positive cancer patients.

Indexed as

DNA MethylationGene Expression Regulation, NeoplasticBreast NeoplasmsCell Line, TumorCpG IslandsEstradiolEstrogen Receptor alphaEstrogensFemaleGene SilencingHomeodomain ProteinsHumansPromoter Regions, GeneticSignal TransductionTamoxifenafimoxifeneEstradiolEstrogen Receptor alphaEstrogensHomeodomain ProteinsHOXB13 protein, humanTamoxifen

Identifiers

PMID18499701
PMCPMC2899848
OpenAlexW2151365391

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.