Evidence map›Paper›PMID 18499661›Full record

ArticleThe Journal of biological chemistry2008

Polypyrimidine tract-binding protein (PTB) differentially affects malignancy in a cell line-dependent manner.

Chen Wang, John T Norton, Supurna Ghosh, Julie Kim, Kazuo Fushimi, Jane Y Wu, M Sharon Stack, Sui Huang

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it, 55 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Chen WangDepartment of Cell and Molecular Biology, Feinberg School of Medicine of Northwestern University, Chicago, IL 60611, USA.
John T Norton
Supurna Ghosh
Julie Kim
Kazuo Fushimi
Jane Y Wu
M Sharon Stack
Sui Huang
Molecular Biology Consortium · USNorthwestern University · US

Funding

The Structure and Function of Perinucleolar CompartmentR01GM078555 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI HUANG, SUI · 2007 to 2015
$2.6M
The Perinucleolar Compartment as Breast Cancer MarkerR33CA097761 · NCI · NORTHWESTERN UNIVERSITY · PI HUANG, SUI · 2003 to 2005
$1.2M
Alternative splicing regulation of caspase-2 geneR01GM070967 · NIGMS · VANDERBILT UNIVERSITY · PI WU, JANE Y · 2005 to 2008
$939k
Interaction of FOXO1 and Progesterone Receptor in Endometrial CancerR21CA127674 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI KIM, JI-YONG JULIE · 2008 to 2009
$374k
NCI NIH HHS CA 097761NCI NIH HHS R21 CA127674NIGMS NIH HHS GM 070967NIGMS NIH HHS GM 078555-01
6 · The paper itself

Abstract

RNA processing is altered during malignant transformation, and expression of the polypyrimidine tract-binding protein (PTB) is often increased in cancer cells. Although some data support that PTB promotes cancer, the functional contribution of PTB to the malignant phenotype remains to be clarified. Here we report that although PTB levels are generally increased in cancer cell lines from multiple origins and in endometrial adenocarcinoma tumors, there appears to be no correlation between PTB levels and disease severity or metastatic capacity. The three isoforms of PTB increase heterogeneously among different tumor cells. PTB knockdown in transformed cells by small interfering RNA decreases cellular growth in monolayer culture and to a greater extent in semi-solid media without inducing apoptosis. Down-regulation of PTB expression in a normal cell line reduces proliferation even more significantly. Reduction of PTB inhibits the invasive behavior of two cancer cell lines in Matrigel invasion assays but enhances the invasive behavior of another. At the molecular level, PTB in various cell lines differentially affects the alternative splicing pattern of the same substrates, such as caspase 2. Furthermore, overexpression of PTB does not enhance proliferation, anchorage-independent growth, or invasion in immortalized or normal cells. These data demonstrate that PTB is not oncogenic and can either promote or antagonize a malignant trait dependent upon the specific intra-cellular environment.

Indexed as

Alternative SplicingAmino Acid SequenceAnimalsApoptosisCaspase 2Cell LineCell Transformation, NeoplasticDown-RegulationGene Expression Regulation, NeoplasticHumansMiceMolecular Sequence DataNeoplasm InvasivenessNeoplasmsPolypyrimidine Tract-Binding ProteinProtein IsoformsCaspase 2Polypyrimidine Tract-Binding ProteinProtein IsoformsRNA, Small Interfering

Identifiers

PMID18499661
PMCPMC2459264
OpenAlexW2000100263

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.