Evidence map›Paper›PMID 18496222›Full record

SynthesisGenetics in medicine : official journal of the American College of Medical Genetics2008

Meta-analysis and pooled analysis of GSTM1 and CYP1A1 polymorphisms and oral and pharyngeal cancers: a HuGE-GSEC review.

Leonor Varela-Lema, Emanuela Taioli, Alberto Ruano-Ravina, Juan M Barros-Dios, Devasena Anantharaman, Simone Benhamou, Stefania Boccia, Rajani A Bhisey, Gabriella Cadoni, Ettore Capoluongo and 20 more

Open access · bronzeAbstract readMeta-Analysis
In one paragraph

Synthesis in Genetics in medicine : official journal of the American College of Medical Genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 7 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 7 pooled it
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 7 syntheses or guidelines pooled it, 75 citations in OpenAlex.

  1. Pooled it
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  4. Cytochrome P450 1A1 Ile462Val polymorphism and oral carcinoma risk: an updated meta-analysis including 1,515 cases and 2,233 controls.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2012
    Pooled it
  5. Quantitative assessment of the associations between CYP1A1 polymorphisms and gastric cancer risk.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2012
    Pooled it
  6. Pooled it
  7. Pooled it
  8. The Fagerström and AUDIT Tests as Probable Screening Tools in Oral Cancer and Their Correlation withInternational journal of environmental research and public health · 2022
    Article
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  15. Review
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  18. A review of genetic epidemiology of head and neck cancer related to polymorphisms in metabolic genes, cell cycle control and alcohol metabolism.Acta otorhinolaryngologica Italica : organo ufficiale della Societa italiana di otorinolaringologia e chirurgia cervico-facciale · 2012
    Review
  19. Article
  20. Review of studies on metabolic genes and cancer in populations of African descent.Genetics in medicine : official journal of the American College of Medical Genetics · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 20 institutions in 14 countries.

Leonor Varela-LemaDepartment of Preventive Medicine and Public Health, University of Santiago de Compostela, Santiago de Compostela, Spain.
Emanuela Taioli
Alberto Ruano-Ravina
Juan M Barros-Dios
Devasena Anantharaman
Simone Benhamou
Stefania Boccia
Rajani A Bhisey
Gabriella Cadoni
Ettore Capoluongo
Chien-Jen Chen
William Foulkes
Eny Maria Goloni-Bertollo
Ana Hatagima
Richard B Hayes
Takahiko Katoh
Sergio Koifman
Phillip Lazarus
Johannes J Manni
Manoj Mahimkar
Shunji Morita
Jong Park
Kwang-Kyun Park
Erika Cristina Pavarino Bertelli
Enilze Maria de Souza Fonseca Ribeiro
Bidyut Roy
Margaret R Spitz
Richard C Strange
Qingyi Wei
Camille C Ragin
Universidade de Santiago de Compostela · ESAdvanced Centre for Treatment, Research and Education in Cancer · INFaculdade de Medicina de São José do Rio Preto · BRFundação Oswaldo Cruz · BRThe University of Texas MD Anderson Cancer Center · USUniversità Cattolica del Sacro Cuore · ITUniversity of Pittsburgh · USCatholic University of America · USCenter for Cancer Research · USIndian Statistical Institute · INKeele University · GBKumamoto Health Science University · JPMaastricht University Medical Centre · NLMcGill University · CAMoffitt Cancer Center · USNational Taipei University of Education · TWPennsylvania State University · USTata Memorial Hospital · INUniversidade Federal do Paraná · BRUniversité d'Évry Val-d'Essonne · FR

Funding

WILD TYPE P53-BASED ADJUVANT IMMUNOTHERAPY FOR SCCHNP50CA097190 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHRISTOPHER J. BAKKENIST · 2004 to 2026
$49.6M
University of Pittsburgh Clinical and Translational Science InstitutionKL2RR024154 · NCRR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2006 to 2011
$22.2M
STUDIES OF OCCUPATIONAL CANCER--MOLECULAR EPIDEMIOLOGYZ01CP010121 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI ROTHMAN, NATHANIEL · 1997 to 2008
$4.4M
CLINICAL/IMMUNOLOGIC/GENETIC ANALYSES OF AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROMEZ01AI000732 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI RAO, VEMULKONDA · 1995 to 2008
$1.1M
XENOBIOTIC METABOLIZING ENZYMES AND ORAL CANCER RISKF32CA073173 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI PARK, JONG Y · 1997 to 1999
–
NCI NIH HHS 5P50CA097190NCI NIH HHS F32 CA073173NCI NIH HHS P50 CA097190NCI NIH HHS P50CA097190NCRR NIH HHS 1KL2 RR024154-02NCRR NIH HHS KL2 RR024154
6 · The paper itself

Abstract

The association of GSTM1 and CYP1A1 polymorphisms and oral and pharyngeal cancers was assessed through a meta-analysis of published case-control studies and a pooled analysis of both published and unpublished case-control studies from the Genetic Susceptibility to Environmental Carcinogens database (http://www.upci.upmc.edu/research/ccps/ccontrol/index.html ). Thirty publications used in the meta-analysis included a total of 7783 subjects (3177 cases and 4606 controls); 21 datasets, 9397 subjects (3130 cases and 6267 controls) were included in the pooled analysis. The GSTM1 deletion was 2-fold more likely to occur in African American and African cases than controls (odds ratio: 1.7, 95% confidence interval: 0.9-3.3), although this was not observed among whites (odds ratio: 1.0, 95% confidence interval: 0.9-1.1). The meta-analysis and pooled analysis showed a significant association between oral and pharyngeal cancer and the CYP1A1 MspI homozygous variant (meta-ORm2/m2: 1.9, 95% confidence interval: 1.4-2.7; Pooled ORm2m2: 2.0, 95% confidence interval: 1.3-3.1; ORm1m2 or [infi]m2m2: 1.3, 95% confidence interval: 1.1-1.6). The association was present for the CYP1A1 (exon 7) polymorphism (ORVal/Val: 2.2, 95% confidence interval: 1.1-4.5) in ever smokers. A joint effect was observed for GSTM1 homozygous deletion and the CYP1A1 m1m2 variant on cancer risk. Our findings suggest that tobacco use and genetic factors play a significant role in oral and pharyngeal cancer.

Indexed as

Polymorphism, GeneticAllelesCase-Control StudiesCytochrome P-450 CYP1A1ExonsGenetic Predisposition to DiseaseGlutathione TransferaseHomozygoteHumansMouth NeoplasmsOdds RatioPharyngeal NeoplasmsTobacco Use DisorderCytochrome P-450 CYP1A1Glutathione Transferase

Identifiers

PMID18496222
PMCPMC4036819
OpenAlexW1966007111

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.