Evidence map›Paper›PMID 18495939›Full record

ArticleRNA (New York, N.Y.)2008

In vitro expression of the HIV-2 genomic RNA is controlled by three distinct internal ribosome entry segments that are regulated by the HIV protease and the Gag polyprotein.

Emiliano P Ricci, Cécile H Herbreteau, Didier Decimo, Andreas Schaupp, Siddhartha A K Datta, Alan Rein, Jean-Luc Darlix, Théophile Ohlmann

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. A researcher's guide to the galaxy of IRESs.Cellular and molecular life sciences : CMLS · 2017
    Review
  5. Review
  6. Article
  7. Article
  8. Article
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  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Toward a structural understanding of IRES RNA function.Current opinion in structural biology · 2009
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Emiliano P RicciEcole Normale Supérieure de Lyon, Unité de Virologie Humaine, IFR 128, Lyon F-69364, France.
Cécile H Herbreteau
Didier Decimo
Andreas Schaupp
Siddhartha A K Datta
Alan Rein
Jean-Luc Darlix
Théophile Ohlmann
École Normale Supérieure de Lyon · FRNational Cancer Institute · US

Funding

Interactions of Retroviral Proteins with Nucleic AcidsZIABC010512 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI REIN, ALAN · 2009 to 2025
$7.7M
Interactions of Retroviral Proteins with Nucleic AcidsZ01BC010512 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI REIN, ALAN · 2003 to 2008
$590k
Intramural NIH HHS
6 · The paper itself

Abstract

The HIV-2 genomic RNA serves both as a messenger for protein synthesis and as a genome for viral assembly and particle production. Our previous work has shown that the HIV-2 genomic RNA encodes two additional Gag proteins that are N-terminal truncated isoforms of the p57 Gag polyprotein. In this study, by the use of mono- and bicistronic RNAs we show that translation at the three AUGs is driven by three distinct and independent internal ribosome entry segments both in vitro and ex vivo. Furthermore we used the recombinant Gag and HIV-2 protease to show that, in vitro, translation is tightly regulated by these two viral proteins. This regulation is exerted both at the level of protein production and also on the selection of the AUG initiation site which changes the ratio at which the three different Gag isoforms are produced.

Indexed as

gag Gene Products, Human Immunodeficiency VirusGene ExpressionHeLa CellsHIV-2HIV ProteaseHumansProtein BiosynthesisRibosomesRNA, Viralgag Gene Products, Human Immunodeficiency VirusHIV ProteaseRNA, Viral

Identifiers

PMID18495939
PMCPMC2441975
OpenAlexW2148629103

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.