Evidence map›Paper›PMID 18493315›Full record

ArticlePloS one2008

C2 and CFB genes in age-related maculopathy and joint action with CFH and LOC387715 genes.

Johanna Jakobsdottir, Yvette P Conley, Daniel E Weeks, Robert E Ferrell, Michael B Gorin

2 registry-linked trialsOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
12.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01115387 active not recruitingnot on this mapstarted 2011, after this paper: background citation

Genetics of Age Related Maculopathy

TypeobservationalSponsorUniversity of California, Los AngelesRan2011 to 2027Enrolled603ConditionsAge-related Macular Degeneration, Age-related MaculopathyArmsObservational-1, Observational-2
NCT02248324 unknown statusnot on this mapstarted 2012, after this paper: background citation

A Multicenter Study on the Investigation of Previously Verified Leading Gene Polymorphisms Related to Age-related Macular Degeneration in Turkish Population

TypeobservationalSponsorKocatepe UniversityRan2012 to 2017Enrolled5,000ConditionsAge-related Macular Degeneration
3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 106 citations in OpenAlex.

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  11. Risk factors and biomarkers of age-related macular degeneration.Progress in retinal and eye research · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Johanna JakobsdottirDepartment of Biostatistics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.
Yvette P Conley
Daniel E Weeks
Robert E Ferrell
Michael B Gorin
University of Pittsburgh · US

Funding

GENETICS OF AGE-RELATED MACULOPATHYR01EY009859 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GORIN, MICHAEL B · 1993 to 2011
$11.5M
NEI NIH HHS R01 EY009859NEI NIH HHS R01EY009859
6 · The paper itself

Abstract

backgroundAge-related maculopathy (ARM) is a common cause of visual impairment in the elderly populations of industrialized countries and significantly affects the quality of life of those suffering from the disease. Variants within two genes, the complement factor H (CFH) and the poorly characterized LOC387715 (ARMS2), are widely recognized as ARM risk factors. CFH is important in regulation of the alternative complement pathway suggesting this pathway is involved in ARM pathogenesis. Two other complement pathway genes, the closely linked complement component receptor (C2) and complement factor B (CFB), were recently shown to harbor variants associated with ARM. METHODS/PRINCIPAL

findingsWe investigated two SNPs in C2 and two in CFB in independent case-control and family cohorts of white subjects and found rs547154, an intronic SNP in C2, to be significantly associated with ARM in both our case-control (P-value 0.00007) and family data (P-value 0.00001). Logistic regression analysis suggested that accounting for the effect at this locus significantly (P-value 0.002) improves the fit of a genetic risk model of CFH and LOC387715 effects only. Modeling with the generalized multifactor dimensionality reduction method showed that adding C2 to the two-factor model of CFH and LOC387715 increases the sensitivity (from 63% to 73%). However, the balanced accuracy increases only from 71% to 72%, and the specificity decreases from 80% to 72%. CONCLUSIONS/SIGNIFICANCE: C2/CFB significantly influences AMD susceptibility and although accounting for effects at this locus does not dramatically increase the overall accuracy of the genetic risk model, the improvement over the CFH-LOC387715 model is statistically significant.

Indexed as

AgingCase-Control StudiesComplement C2Complement Factor BComplement Factor HGenetic Predisposition to DiseaseHumansMacular DegenerationPolymorphism, Single NucleotideComplement C2Complement Factor BComplement Factor H

Identifiers

PMID18493315
PMCPMC2374901
OpenAlexW1977681642

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.