Evidence map›Paper›PMID 18493036›Full record

ArticleGenetics2008

Gene expression profiling of flagellar disassembly in Chlamydomonas reinhardtii.

Kara L Chamberlain, Steven H Miller, Laura R Keller

Abstract readComparative Study
In one paragraph

Article in Genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Physical Forces in Regeneration of Cells and Tissues.Cold Spring Harbor perspectives in biology · 2025
    Review
  3. Frontiers in cell and developmental biology · 2024
    Review
  4. Article
  5. Ciliogenesis requires sphingolipid-dependent membrane and axoneme interaction.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Regulatory Factor X (RFX)-mediated transcriptional rewiring of ciliary genes in animals.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kara L ChamberlainDepartment of Biological Science, Florida State University, Tallahassee, FL 32306-4370, USA.
Steven H Miller
Laura R Keller

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Flagella are sensory organelles that interact with the environment through signal transduction and gene expression networks. We used microarray profiling to examine gene regulation associated with flagellar length change in the green alga Chlamydomonas reinhardtii. Microarrays were probed with fluorescently labeled cDNAs synthesized from RNA extracted from cells before and during flagellar assembly or disassembly. Evaluation of the gene expression profiles identified >100 clones showing at least a twofold change in expression during flagellar length changes. Products of these genes are associated not only with flagellar structure and motility but also with other cellular responses, including signal transduction and metabolism. Expression of specific genes from each category was further characterized at higher resolution by using quantitative real-time PCR (qRT-PCR). Analysis and comparison of the gene expression profiles coupled to flagellar assembly and disassembly revealed that each process involves a new and uncharacterized whole-cell response to flagellar length changes. This analysis lays the groundwork for a more comprehensive understanding of the cellular and molecular networks regulating flagellar length changes.

Indexed as

Gene Expression ProfilingAnimalsChlamydomonas reinhardtiiFlagellaGene Expression RegulationMicroscopy, FluorescenceOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionSignal Transduction

Identifiers

PMID18493036
PMCPMC2390646

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.