Evidence map›Paper›PMID 18489780›Full record

ArticleBMC microbiology2008

High throughput detection of Coxiella burnetii by real-time PCR with internal control system and automated DNA preparation.

Marcus Panning, Jochen Kilwinski, Susanne Greiner-Fischer, Martin Peters, Stefanie Kramme, Dimitrios Frangoulidis, Hermann Meyer, Klaus Henning, Christian Drosten

Abstract readComparative StudyEvaluation Study
In one paragraph

Article in BMC microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Article
  3. Early detection ofMicrobiology spectrum · 2026
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  5. Article
  6. Detection ofFoods (Basel, Switzerland) · 2025
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  7. Article
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  9. High prevalence ofVeterinary world · 2020
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Detection of Lyme Disease and Q Fever Agents in Wild Rodents in Central Italy.Vector borne and zoonotic diseases (Larchmont, N.Y.) · 2015
    Article
  17. Coxiella burnetii in central Italy: novel genotypes are circulating in cattle and goats.Vector borne and zoonotic diseases (Larchmont, N.Y.) · 2014
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Marcus PanningClinical Virology, Bernhard-Nocht Institute for Tropical Medicine, Bernhard Nocht Str, 74, 20359 Hamburg, Germany. panning@virology-bonn.de
Jochen Kilwinski
Susanne Greiner-Fischer
Martin Peters
Stefanie Kramme
Dimitrios Frangoulidis
Hermann Meyer
Klaus Henning
Christian Drosten

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCoxiella burnetii is the causative agent of Q-fever, a widespread zoonosis. Due to its high environmental stability and infectivity it is regarded as a category B biological weapon agent. In domestic animals infection remains either asymptomatic or presents as infertility or abortion. Clinical presentation in humans can range from mild flu-like illness to acute pneumonia and hepatitis. Endocarditis represents the most common form of chronic Q-fever. In humans serology is the gold standard for diagnosis but is inadequate for early case detection. In order to serve as a diagnostic tool in an eventual biological weapon attack or in local epidemics we developed a real-time 5'nuclease based PCR assay with an internal control system. To facilitate high-throughput an automated extraction procedure was evaluated.

resultsTo determine the minimum number of copies that are detectable at 95% chance probit analysis was used. Limit of detection in blood was 2,881 copies/ml [95%CI, 2,188-4,745 copies/ml] with a manual extraction procedure and 4,235 copies/ml [95%CI, 3,143-7,428 copies/ml] with a fully automated extraction procedure, respectively. To demonstrate clinical application a total of 72 specimens of animal origin were compared with respect to manual and automated extraction. A strong correlation between both methods was observed rendering both methods suitable. Testing of 247 follow up specimens of animal origin from a local Q-fever epidemic rendered real-time PCR more sensitive than conventional PCR.

conclusionA sensitive and thoroughly evaluated real-time PCR was established. Its high-throughput mode may show a useful approach to rapidly screen samples in local outbreaks for other organisms relevant for humans or animals. Compared to a conventional PCR assay sensitivity of real-time PCR was higher after testing samples from a local Q-fever outbreak.

Indexed as

Animal DiseasesAnimalsAutomationCell LineCoxiella burnetiiDNA, BacterialFemaleGene DosageHumansMalePolymerase Chain ReactionQ FeverSensitivity and SpecificitySpecimen HandlingDNA, Bacterial

Identifiers

PMID18489780
PMCPMC2397412

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.