Evidence map›Paper›PMID 18489764›Full record

ArticleBMC immunology2008

Id1 induces apoptosis through inhibition of RORgammat expression.

Yuanzheng Yang, Hong-Cheng Wang, Xiao-Hong Sun

Open access · goldAbstract read
In one paragraph

Article in BMC immunology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.2field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yuanzheng YangImmunobiology and Cancer Program, Oklahoma Medical Research Foundation, 825 NE 13th St, Oklahoma City, OK 73104, USA. yuayang@utmb.edu
Hong-Cheng Wang
Xiao-Hong Sun
Oklahoma Medical Research Foundation · US

Funding

MOLECULAR MECHANISMS OF T CELL LEUKEMOGENESIS BY TALR01CA077553 · NCI · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI SUN, XIAO-HONG · 1999 to 2009
$2.5M
NCI NIH HHS CA77553NCI NIH HHS R01 CA077553
6 · The paper itself

Abstract

backgroundBasic helix-loop-helix E proteins are transcription factors that play crucial roles in T cell development by controlling thymocyte proliferation, differentiation and survival. E protein functions can be repressed by their naturally occurring inhibitors, Id proteins (Id1-4). Transgenic expression of Id1 blocks T cell development and causes massive apoptosis of developing thymocytes. However, the underlying mechanisms are not entirely understood due to relatively little knowledge of the target genes regulated by E proteins.

resultsWe designed a unique strategy to search for genes directly controlled by E proteins and found RORgammat to be a top candidate. Using microarray analyses and reverse-transcriptase PCR assays, we showed that Id1 expression diminished RORgammat mRNA levels in T cell lines and primary thymocytes while induction of E protein activity restored RORgammat expression. E proteins were found to specifically bind to the promoter region of RORgammat, suggesting their role in activating transcription of the gene. Functional significance of E protein-controlled RORgammat expression was established based on the finding that RORgammat rescued apoptosis caused by Id1 overexpression. Furthermore, expression of RORgammat prevented Id1-induced p38 MAP kinase hyper-activation.

conclusionThese results suggest that E protein-dependent RORgammat gene expression aids the survival of developing thymocytes, which provides a possible explanation for the massive apoptosis found in Id1 transgenic mice.

Indexed as

ApoptosisAnimalsCell DifferentiationCell LineGene Expression RegulationInhibitor of Differentiation Protein 1MiceNuclear Receptor Subfamily 1, Group F, Member 3Oligonucleotide Array Sequence AnalysisReceptors, EstrogenReceptors, Retinoic AcidReceptors, Thyroid HormoneRecombinant Fusion ProteinsTamoxifenTCF Transcription FactorsT-LymphocytesIdb1 protein, mouseInhibitor of Differentiation Protein 1Nuclear Receptor Subfamily 1, Group F, Member 3Receptors, EstrogenReceptors, Retinoic AcidReceptors, Thyroid HormoneRecombinant Fusion ProteinsRorc protein, mouseTamoxifenTcf7l1 protein, mouseTCF Transcription FactorsTranscription Factor 7-Like 1 Protein

Identifiers

PMID18489764
PMCPMC2408562
OpenAlexW2083674697

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.