Evidence map›Paper›PMID 18485440›Full record

ArticleVirology2008

Alphavirus production is inhibited in neurofibromin 1-deficient cells through activated RAS signalling.

Olga A Kolokoltsova, Aaron M Domina, Andrey A Kolokoltsov, Robert A Davey, Scott C Weaver, Stanley J Watowich

Open access · greenAbstract read
In one paragraph

Article in Virology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Olga A KolokoltsovaDepartment of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, TX, USA. oakoloko@utmb.edu
Aaron M Domina
Andrey A Kolokoltsov
Robert A Davey
Scott C Weaver
Stanley J Watowich
The University of Texas Medical Branch at Galveston · US

Funding

Training in Emerging Infectious Diseases and BiodefenseT32AI007536 · NIAID · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI WHITE, ARTHUR CLINTON · 1998 to 2013
$4.1M
ECOLOGY AND GENETICS OF VENEZUELAN EQUINE ENCEPHALITISR01AI048807 · NIAID · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI WEAVER, SCOTT C · 2001 to 2005
$1.9M
Novel Countermeasures to Hemorrhagic Fever VirusesR21AI053551 · NIAID · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI WATOWICH, STANLEY J · 2002 to 2003
$447k
NIAID NIH HHS 2 T32 AI007536-06NIAID NIH HHS AI48807NIAID NIH HHS AI53551-01NIAID NIH HHS R01 AI048807NIAID NIH HHS R21 AI053551NIAID NIH HHS T32 AI007536
6 · The paper itself

Abstract

Virus-host interactions essential for alphavirus pathogenesis are poorly understood. To address this shortcoming, we coupled retrovirus insertional mutagenesis and a cell survival selection strategy to generate clonal cell lines broadly resistant to Sindbis virus (SINV) and other alphaviruses. Resistant cells had significantly impaired SINV production relative to wild-type (WT) cells, although virus binding and fusion events were similar in both sets of cells. Analysis of the retroviral integration sites identified the neurofibromin 1 (NF1) gene as disrupted in alphavirus-resistant cell lines. Subsequent analysis indicated that expression of NF1 was significantly reduced in alphavirus-resistant cells. Importantly, independent down-regulation of NF1 expression in WT HEK 293 cells decreased virus production and increased cell viability during SINV infection, relative to infected WT cells. Additionally, we observed hyperactive RAS signalling in the resistant HEK 293 cells, which was anticipated because NF1 is a negative regulator of RAS. Expression of constitutively active RAS (HRAS-G12V) in a WT HEK 293 cell line resulted in a marked delay in virus production, compared with infected cells transfected with parental plasmid or dominant-negative RAS (HRAS-S17N). This work highlights novel host cell determinants required for alphavirus pathogenesis and suggests that RAS signalling may play an important role in neuronal susceptibility to SINV infection.

Indexed as

Alphavirus InfectionsBase SequenceCell LineDNA PrimersDNA, ViralDown-RegulationGenes, rasHost-Pathogen InteractionsHumansMutagenesis, InsertionalNeurofibromin 1NeuronsRNA, Small InterferingSignal TransductionSindbis VirusVirus IntegrationDNA PrimersDNA, ViralNeurofibromin 1RNA, Small Interfering

Identifiers

PMID18485440
PMCPMC3280685
OpenAlexW2087109655

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.