Evidence map›Paper›PMID 18485075›Full record

ArticleMolecular microbiology2008

Identification of FleQ from Pseudomonas aeruginosa as a c-di-GMP-responsive transcription factor.

Jason W Hickman, Caroline S Harwood

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 372 papers.

0numbers the graph read from it
0cells of the map it votes in
372citing papers in PubMed
15.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

372 citing papers in PubMed, 649 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Genomic and phenotypic diversification ofMicrobiology spectrum · 2026
    Article
  6. Review
  7. Article
  8. c-di-GMP is a key regulator of Pseudomonas aeruginosa response to UVA radiation.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2026
    Article
  9. Article
  10. Review
  11. Molecular Mechanisms Underlying the Pathogenicity ofMedicina (Kaunas, Lithuania) · 2026
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Multi-omics characterization of β-myrcene-evolvedFrontiers in molecular biosciences · 2026
    Article
  17. Article
  18. Review
  19. Article
  20. ComFB, a widespread family of c-di-NMP receptor proteins.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article

312 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jason W HickmanDepartment of Microbiology, University of Washington, Seattle, WA 98195, USA.
Caroline S Harwood
University of Washington · US

Funding

Pseudomonas aeruginosa sensing and responseR01GM056665 · NIGMS · UNIVERSITY OF WASHINGTON · PI HARWOOD, CAROLINE STONE · 1998 to 2011
$3.0M
NIGMS NIH HHS GM56665NIGMS NIH HHS R01 GM056665
6 · The paper itself

Abstract

High levels of the intracellular signalling molecule cyclic diguanylate (c-di-GMP) supress motility and activate exopolysaccharide (EPS) production in a variety of bacterial species. In many bacteria part of the effect of c-di-GMP is on gene expression, but the mechanism involved is not known for any species. We have identified the protein FleQ as a c-di-GMP-responsive transcriptional regulator in Pseudomonas aeruginosa. FleQ is known to activate expression of flagella biosynthesis genes. Here we show that it also represses transcription of genes including the pel operon involved in EPS biosynthesis, and that this repression is relieved by c-di-GMP. Our in vivo data indicate that FleQ represses pel transcription and that pel transcription is not repressed when intracellular c-di-GMP levels are high. FleN, a known antiactivator of FleQ also participates in control of pel expression. In in vitro experiments we found that FleQ binds to pel promoter DNA and that this binding is inhibited by c-di-GMP. FleQ binds radiolabelled c-di-GMP in vitro. FleQ does not have amino acid motifs that resemble previously defined c-di-GMP binding domains. Our results show that FleQ is a new type of c-di-GMP binding protein that controls the transcriptional regulation of EPS biosynthesis genes in P. aeruginosa.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsCyclic GMPDNA, BacterialDNA Transposable ElementsElectrophoretic Mobility Shift AssayGene DeletionGene Expression ProfilingModels, BiologicalMutagenesis, InsertionalPromoter Regions, GeneticProtein BindingPseudomonas aeruginosaTrans-ActivatorsTranscription FactorsTranscription, GeneticBacterial Proteinsbis(3',5')-cyclic diguanylic acidCyclic GMPDNA, BacterialDNA Transposable ElementsfleN protein, Pseudomonas aeruginosaFleQ protein, Pseudomonas aeruginosaTrans-ActivatorsTranscription Factors

Identifiers

PMID18485075
PMCPMC2612001
OpenAlexW2105618126

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.