Evidence map›Paper›PMID 18483614›Full record

ArticleInternational journal of plant genomics2008

Soybean genomics: Developments through the use of cultivar "Forrest".

David A Lightfoot

Open access · hybridAbstract read
In one paragraph

Article in International journal of plant genomics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
5.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. QTL analysis of soybean seed weight across multi-genetic backgrounds and environments.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012
    Article
  5. Recombination suppression at the dominant Rhg1/Rfs2 locus underlying soybean resistance to the cyst nematode.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012
    Article
  6. Selection of a core set of RILs from Forrest x Williams 82 to develop a framework map in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011
    Article
  7. Identification of QTL in soybean underlying resistance to herbivory by Japanese beetles (Popillia japonica, Newman).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2010
    Article
  8. Article
  9. Article
  10. Separate loci underlie resistance to root infection and leaf scorch during soybean sudden death syndrome.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2008
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

David A LightfootDepartment of Plant Soil and General Agriculture, Center for Excellence, The Illinois Soybean Center, Southern Illinois University at Carbondale, 62901-4415, USA. ga4082@siu.edu <ga4082@siu.edu>
Southern Illinois University Carbondale · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Legume crops are particularly important due to their ability to support symbiotic nitrogen fixation, a key to sustainable crop production and reduced carbon emissions. Soybean (Glycine max) has a special position as a major source of increased protein and oil production in the common grass-legume rotation. The cultivar "Forrest" has saved US growers billions of dollars in crop losses due to resistances programmed into the genome. Moreover, since Forrest grows well in the north-south transition zone, breeders have used this cultivar as a bridge between the southern and northern US gene pools. Investment in Forrest genomics resulted in the development of the following research tools: (i) a genetic map, (ii) three RIL populations (96 > n > 975), (iii) approximately 200 NILs, (iv) 115 220 BACs and BIBACs, (v) a physical map, (vi) 4 different minimum tiling path (MTP) sets, (vii) 25 123 BAC end sequences (BESs) that encompass 18.5 Mbp spaced out from the MTPs, and 2 000 microsatellite markers within them (viii) a map of 2408 regions each found at a single position in the genome and 2104 regions found in 2 or 4 similar copies at different genomic locations (each of >150 kbp), (ix) a map of homoeologous regions among both sets of regions, (x) a set of transcript abundance measurements that address biotic stress resistance, (xi) methods for transformation, (xii) methods for RNAi, (xiii) a TILLING resource for directed mutant isolation, and (xiv) analyses of conserved synteny with other sequenced genomes. The SoyGD portal at sprovides access to the data. To date these resources assisted in the genomic analysis of soybean nodulation and disease resistance. This review summarizes the resources and their uses.

Identifiers

PMID18483614
PMCPMC2376204
OpenAlexW2028112617

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.