Evidence map›Paper›PMID 18481082›Full record

ArticlePlanta2008

Expression and evolutionary features of the hexokinase gene family in Arabidopsis.

Abhijit Karve, Bradley L Rauh, Xiaoxia Xia, Muthugapatti Kandasamy, Richard B Meagher, Jen Sheen, Brandon D Moore

Open access · greenAbstract read
In one paragraph

Article in Planta, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
7.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 136 citations in OpenAlex.

  1. Responses of Male and Female Cucumber Flowers toPlants (Basel, Switzerland) · 2026
    Article
  2. Functional Characterization ofPlants (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Genomic Analysis of Hexokinase Genes in Foxtail Millet (International journal of molecular sciences · 2025
    Article
  8. Article
  9. Identification ofInternational journal of molecular sciences · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Frontiers in plant science · 2024
    Article
  16. Structure and Expression Analysis ofInternational journal of molecular sciences · 2023
    Article
  17. Article
  18. Article
  19. Article
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Abhijit KarveDepartment of Genetics and Biochemistry, Clemson University, Clemson, SC, 29634, USA.
Bradley L Rauh
Xiaoxia Xia
Muthugapatti Kandasamy
Richard B Meagher
Jen Sheen
Brandon D Moore
Clemson University · USUniversity of Georgia · USMassachusetts General Hospital · US

Funding

DIFFERENTIAL EXPRESSION OF THE DIVERSE PLANT ACTINSR01GM036397 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI MEAGHER, RICHARD BRIAN · 1986 to 2011
$4.3M
NIGMS NIH HHS R01 GM036397
6 · The paper itself

Abstract

Arabidopsis hexokinase1 (HXK1) is a moonlighting protein that has separable functions in glucose signaling and in glucose metabolism. In this study, we have characterized expression features and glucose phosphorylation activities of the six HXK gene family members in Arabidopsis thaliana. Three of the genes encode catalytically active proteins, including a stromal-localized HXK3 protein that is expressed mostly in sink organs. We also show that three of the genes encode hexokinase-like (HKL) proteins, which are about 50% identical to AtHXK1, but do not phosphorylate glucose or fructose. Expression studies indicate that both HKL1 and HKL2 transcripts occur in most, if not all, plant tissues and that both proteins are targeted within cells to mitochondria. The HKL1 and HKL2 proteins have 6-10 amino acid insertions/deletions (indels) at the adenosine binding domain. In contrast, HKL3 transcript was detected only in flowers, the protein lacks the noted indels, and the protein has many other amino acid changes that might compromise its ability even to bind glucose or ATP. Activity measurements of HXKs modified by site-directed mutagenesis suggest that the lack of catalytic activities in the HKL proteins might be attributed to any of numerous existing changes. Sliding windows analyses of coding sequences in A. thaliana and A. lyrata ssp. lyrata revealed a differential accumulation of nonsynonymous changes within exon 8 of both HKL1 and HXK3 orthologs. We further discuss the possibility that the non-catalytic HKL proteins have regulatory functions instead of catalytic functions.

Indexed as

Evolution, MolecularGene Expression Regulation, EnzymologicGene Expression Regulation, PlantAmino Acid SequenceArabidopsisArabidopsis ProteinsCatalysisGene Expression ProfilingGene OrderGlucokinaseHexokinaseMolecular Sequence DataMultigene FamilyPhylogenyRNA, MessengerSequence AlignmentArabidopsis ProteinsGlucokinaseHexokinaseRNA, Messenger

Identifiers

PMID18481082
PMCPMC2953952
OpenAlexW1971910567

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.