Evidence map›Paper›PMID 18480829›Full record

ArticleGenes and immunity2008

Prep1/Pbx2 complexes regulate CCL2 expression through the -2578 guanine polymorphism.

E K Wright, S H Page, S A Barber, J E Clements

Open access · greenAbstract read
In one paragraph

Article in Genes and immunity, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Review
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  6. A Genome-Wide Association Study Identifies a Novel Locus for Bortezomib-Induced Peripheral Neuropathy in European Patients with Multiple Myeloma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2016
    Article
  7. Article
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  11. Inherited variants in the chemokine CCL2 gene and prostate cancer aggressiveness in a Caucasian cohort.Clinical cancer research : an official journal of the American Association for Cancer Research · 2011
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

E K WrightMcKusick-Nathans Institute of Genetic Medicine, Department of Molecular and Comparative Pathobiology, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
S H Page
S A Barber
J E Clements
Johns Hopkins Medicine · USBooz Allen Hamilton (United States) · USJohns Hopkins University · US

Funding

Project 4: Intracellular mechanism of virus persistence in astrocytes/macrophagesP01MH070306 · NIMH · JOHNS HOPKINS UNIVERSITY · PI CLEMENTS, JANICE E · 2004 to 2015
$16.0M
Glial Cell Inflammatory Mechanisms &CNS RegulationR01NS047984 · NINDS · JOHNS HOPKINS UNIVERSITY · PI CLEMENTS, JANICE E · 2004 to 2008
$1.8M
CNS Mechanisms of MCP-1 TranscriptionR01NS050028 · NINDS · JOHNS HOPKINS UNIVERSITY · PI CLEMENTS, JANICE E · 2004 to 2008
$1.8M
NIMH NIH HHS MH70306NIMH NIH HHS P01 MH070306NINDS NIH HHS NS050028NINDS NIH HHS NS47984NINDS NIH HHS R01 NS047984NINDS NIH HHS R01 NS050028
6 · The paper itself

Abstract

CC-chemokine ligand 2 (CCL2) is the major chemoattractant protein that recruits monocytes to sites of inflammation and increased expression of CCL2 is associated with numerous inflammatory diseases including human immunodeficiency virus-associated dementia (HIV-D). The -2578 guanine polymorphism in the CCL2 promoter has been associated with increased expression of CCL2 as well as pathogenesis of HIV-D; however, the molecular mechanism of regulation is unknown. We propose a molecular model for -2578 G-regulated CCL2 expression in astrocytes, which are major producers of CCL2 in the brain. The -2578 G polymorphism creates a consensus-binding site for the transcriptional regulator Prep1, which along with binding partner Pbx2, preferentially binds the -2578 G allele. CCL2 promoters harboring the G allele under unstimulated conditions exhibit a lower basal activity compared to the ancestral A allele. Upon interleukin-1 beta stimulation, Prep1/Pbx2 complexes maintain the ability to bind -2578 G alleles, yet transcription levels from promoters that harbor the A or G allele are equally activated, suggesting that the -2578 region does not influence CCL2 transcription under proinflammatory conditions. Therefore, promoters that harbor the -2578 G allele undergo a higher fold induction and by extension, individuals homozygous for -2578 G would be expected to exhibit hyper-responsive CCL2 phenotypes during periods of inflammation.

Indexed as

GuaninePolymorphism, GeneticBase SequenceBlotting, WesternCells, CulturedChemokine CCL2Homeodomain ProteinsHumansMolecular Sequence DataPromoter Regions, GeneticProto-Oncogene ProteinsChemokine CCL2GuanineHomeodomain ProteinsPBX2 protein, humanPKNOX1 protein, humanProto-Oncogene Proteins

Identifiers

PMID18480829
PMCPMC2570563
OpenAlexW1977903696

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.