Evidence map›Paper›PMID 18480317›Full record

ArticleJournal of the American Society of Nephrology : JASN2008

Epithelial-to-mesenchymal transition in early transplant tubulointerstitial damage.

Matthew J Vitalone, Philip J O'Connell, Elvira Jimenez-Vera, Aysen Yuksel, Moses Wavamunno, Caroline L-S Fung, Jeremy R Chapman, Brian J Nankivell

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00611702 (Genomics of Chronic Renal Allograft Rejection), which is not on this map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00611702 completednot on this map

Genomics of Chronic Renal Allograft Rejection

TypeobservationalSponsorNational Institute of Allergy and Infectious Diseases (NIAID)Ran2008 to 2013Enrolled588ConditionsKidney TransplantationArmsKidney biopsy
3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Pathophysiology of the diabetic kidney.Comprehensive Physiology · 2011
    Review
  7. Article
  8. Review
  9. Article
  10. New insights into epithelial-mesenchymal transition in kidney fibrosis.Journal of the American Society of Nephrology : JASN · 2010
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 4 countries.

Matthew J VitaloneCentre for Transplant and Renal Research, University of Sydney, Westmead Hospital, Sydney, Australia.
Philip J O'Connell
Elvira Jimenez-Vera
Aysen Yuksel
Moses Wavamunno
Caroline L-S Fung
Jeremy R Chapman
Brian J Nankivell
Metabolism and Renal Physiology · FRMillennium Institute · BRThe University of Sydney · AU

Funding

Genomics of Chronic Renal Allograft RejectionU01AI070107 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI MURPHY, BARBARA T. · 2006 to 2012
$9.4M
NIAID NIH HHS U01 AI070107NIAID NIH HHS UO1-AI070107-01
6 · The paper itself

Abstract

It is unknown whether epithelial-to-mesenchymal transition (EMT) leads to tubulointerstitial fibrosis in renal transplants. In this study, interstitial fibrosis and markers of EMT were followed in protocol transplant biopsies in 24 patients. Tubulointerstitial damage (TID) increased from 34 to 54% between 1 and 3 mo after transplantation. Detection of EMT depended on the marker used; low levels of alpha-smooth muscle actin were found in 61% of biopsies, but the less specific marker S100 calcium binding protein-A4 (also known as Fsp1) suggested a higher incidence of EMT. The presence or development of TID did not correlate with EMT but instead significantly correlated with subclinical immune activity (P < 0.05). Among biopsies showing TID, microarray analysis revealed differential regulation of 127 genes at 1 mo and 67 genes at 3 mo compared with baseline; these genes were predominantly associated with fibrosis, tissue remodeling, and immune response. Of the 173 EMT-associated genes interrogated, however, only 8.1% showed an expression pattern consistent with EMT at 1 mo and 6.3% at 3 mo. The remainder were not differentially altered, or their changes in expression were opposite those expected to promote EMT. Quantitative reverse transcriptase-PCR revealed that the expression pattern of 12 EMT-associated genes was inconsistent over time, opposite that expected, or consistent with subclinical rejection or inflammation. In conclusion, EMT does not seem to play a significant role in the development of early allograft fibrosis.

Indexed as

Cell TransdifferentiationAdultEpithelial CellsFemaleFibrosisFluorescent Antibody TechniqueGene Expression ProfilingHumansKidneyKidney TransplantationMaleMiddle AgedNephrosclerosisOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionUrothelium

Identifiers

PMID18480317
PMCPMC2488255
OpenAlexW2103440385

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.