Evidence map›Paper›PMID 18473137›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2008

PiRNA-like RNAs in the marsupial Monodelphis domestica identify transcription clusters and likely marsupial transposon targets.

Eric J Devor, Lingyan Huang, Paul B Samollow

Abstract read
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In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Small noncoding RNAs in the germline.Cold Spring Harbor perspectives in biology · 2011
    Review
  6. The biogenesis and function of PIWI proteins and piRNAs: progress and prospect.Annual review of cell and developmental biology · 2009
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Eric J DevorMolecular Genetics and Biophysics, Integrated DNA Technologies, 1710 Commercial Park, Coralville, IA 52241, USA. rdevor@idtdna.com
Lingyan Huang
Paul B Samollow
Integrated DNA Technologies (United States) · USMitchell Institute · US

Funding

NCRR NIH HHS RR014214
6 · The paper itself

Abstract

PIWI-interacting RNAs (piRNAs) are a recently discovered class of small noncoding RNAs that have been detected in human, mouse, rat, zebrafish, and Drosophila genomes. We have utilized a size-directed small-RNA cloning procedure to clone and map more than 300 candidate piRNA-like small RNAs in the genome of the marsupial species Monodelphis domestica. Our results are consistent with those from other species in that the piRNA-like candidate sequences range in size from 28 to 31 nucleotides, show a pronounced preference for uridine at the 5' end, are transcribed from a few large clusters, appear to target transposons, and display virtually no sequence conservation.

Indexed as

Multigene FamilyTranscription, GeneticAnimalsBase SequenceClone CellsDNA Transposable ElementsMaleMolecular Sequence DataMonodelphisRNA, Small InterferingSoftwareDNA Transposable ElementsRNA, Small Interfering

Identifiers

PMID18473137
OpenAlexW1970192432

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.