Evidence map›Paper›PMID 18468965›Full record

ArticleDNA repair2008

Endogenous hSNM1B/Apollo interacts with TRF2 and stimulates ATM in response to ionizing radiation.

Ilja Demuth, Paul S Bradshaw, Anika Lindner, Marco Anders, Stefanie Heinrich, Julia Kallenbach, Karin Schmelz, Martin Digweed, M Stephen Meyn, Patrick Concannon

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 43 citations in OpenAlex.

  1. Pooled it
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  19. The multifunctional SNM1 gene family: not just nucleases.Future oncology (London, England) · 2010
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Ilja DemuthInstitut für Humangenetik, Charité - Universitätsmedizin Berlin, Campus Virchow Klinikum, Berlin, Germany. ilja.demuth@charite.de <ilja.demuth@charite.de>
Paul S Bradshaw
Anika Lindner
Marco Anders
Stefanie Heinrich
Julia Kallenbach
Karin Schmelz
Martin Digweed
M Stephen Meyn
Patrick Concannon
Charité - Universitätsmedizin Berlin · DEHospital for Sick Children · CAUniversity of Toronto · CAUniversity of Virginia · US

Funding

ISOLATION OF THE GENE(S) FOR ATAXIA-TELANGIECTASIAR01CA057569 · NCI · UNIVERSITY OF VIRGINIA · PI CONCANNON, PATRICK · 1992 to 2010
$3.7M
NCI NIH HHS CA 57569NCI NIH HHS R01 CA057569
6 · The paper itself

Abstract

Human SNM1B/Apollo is involved in the cellular response to DNA-damage, however, its precise role is unknown. Recent reports have implicated hSNM1B in the protection of telomeres. We have found hSNM1B to interact with TRF2, a protein which functions in telomere protection and in an early response to ionizing radiation. Here we show that endogenous hSNM1B forms foci which colocalize at telomeres with TRF1 and TRF2. However, we observed that additional hSNM1B foci could be induced upon exposure to ionizing radiation (IR). In live-cell-imaging experiments, hSNM1B localized to photo-induced double-strand breaks (DSBs) within 10s post-induction. Further supporting a role for hSNM1B in the early stages of the cellular response to DSBs, we observed that autophosphorylation of ATM, as well as the phosphorylation of ATM target proteins in response to IR, was attenuated in cells depleted of hSNM1B. These observations suggest an important role for hSNM1B in the response to IR damage, a role that may be, in part, upstream of the central player in maintenance of genome integrity, ATM.

Indexed as

Radiation, IonizingAtaxia Telangiectasia Mutated ProteinsBlotting, WesternCell Cycle ProteinsCell LineDNA-Binding ProteinsDNA Repair EnzymesExodeoxyribonucleasesFluorescent Antibody TechniqueHumansNuclear ProteinsPhosphorylationProtein BindingProtein Serine-Threonine KinasesRNA, Small InterferingTelomeric Repeat Binding Protein 2Ataxia Telangiectasia Mutated ProteinsATM protein, humanCell Cycle ProteinsDCLRE1B protein, humanDNA-Binding ProteinsDNA Repair EnzymesExodeoxyribonucleasesNuclear ProteinsProtein Serine-Threonine KinasesRNA, Small InterferingTelomeric Repeat Binding Protein 2Tumor Suppressor Proteins

Identifiers

PMID18468965
PMCPMC2582150
OpenAlexW2078932864

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.