Evidence map›Paper›PMID 18468907›Full record

ArticleBioorganic & medicinal chemistry2008

Conformation-opioid activity relationships of bicyclic guanidines from 3D similarity analysis.

Karina Martínez-Mayorga, Jose L Medina-Franco, Marc A Giulianotti, Clemencia Pinilla, Colette T Dooley, Jon R Appel, Richard A Houghten

Abstract readComparative Study
In one paragraph

Article in Bioorganic & medicinal chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Karina Martínez-MayorgaTorrey Pines Institute for Molecular Studies, 5775 Old Dixie Highway, Fort Pierce, FL 34946, USA. kmartinez@tpims.org
Jose L Medina-Franco
Marc A Giulianotti
Clemencia Pinilla
Colette T Dooley
Jon R Appel
Richard A Houghten

Funding

In Vivo Screening of Mixture-Based Combinatorial LibrariesR21DA019620 · NIDA · TORREY PINES INST FOR MOLECULAR STUDIES · PI HOUGHTEN, RICHARD ALLEN · 2007 to 2008
$495k
NIDA NIH HHS DA019620NIDA NIH HHS R21 DA019620
6 · The paper itself

Abstract

Conformation of bicyclic guanidines with kappa-opioid receptor activity derived in our laboratory from a positional scanning synthetic combinatorial library is presented in this work. We propose a common bioactive conformation and putative pharmacophoric features by means of 3D similarity methods. Our 'Y' shape molecular binding model explains structure-activity relationships and suggests that the guanidine functionality and a 4-methoxybenzyl group may be involved in key interactions with the receptor. Comparison of our model with known opiates suggest a similar binding mode showing that the bicyclic guanidines presented in this work are suitable scaffolds for further development of new opioid receptors ligands.

Indexed as

Nucleic Acid ConformationBinding SitesBridged Bicyclo Compounds, HeterocyclicCombinatorial Chemistry TechniquesComputational BiologyGuanidineReceptors, OpioidReceptors, Opioid, deltaReceptors, Opioid, muThermodynamicsBridged Bicyclo Compounds, HeterocyclicGuanidineReceptors, OpioidReceptors, Opioid, deltaReceptors, Opioid, mu

Identifiers

PMID18468907
PMCPMC2533277

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.