Evidence map›Paper›PMID 18466338›Full record

ArticleJournal of neurochemistry2008

Regulation of DYT1 gene expression by the Ets family of transcription factors.

Ioanna A Armata, Meenakshisundaram Ananthanarayanan, Natarajan Balasubramaniyan, Pullanipally Shashidharan

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of neurochemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Molecular pathways in dystonia.Neurobiology of disease · 2011
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ioanna A ArmataDepartment of Neurology, Laboratory of Developmental and Molecular Hepatology, Mount Sinai School of Medicine, New York 10029, USA.
Meenakshisundaram Ananthanarayanan
Natarajan Balasubramaniyan
Pullanipally Shashidharan
Icahn School of Medicine at Mount Sinai · US

Funding

BRAIN TORSIN-A AND CHILDHOOD ONSET DYSTONIAR01NS043038 · NINDS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI SHASHIDHARAN, PULLANIPALLY · 2002 to 2012
$3.2M
NINDS NIH HHS R01 NS043038NINDS NIH HHS R01 NS43038
6 · The paper itself

Abstract

The DYT1 gene encodes for torsinA, a protein with widespread tissue distribution, involved in early onset dystonia (EOD). Numerous studies have focused on torsinA function but no information is available on its transcriptional regulation. We cloned mouse and human 5'-upstream DYT1 DNA fragments, exhibiting high transcriptional activity, as well as tissue specificity. We identified a proximal minimal DYT1 promoter within -141 bp for mouse and -191 bp for human with respect to the ATG codon. Primer extension analysis indicated multiple transcription start sites. In silico analysis of approximately 500 bp 5'-upstream DYT1 fragment demonstrated lack of a classical TATA or CAAT box and the presence of a highly conserved direct repeat of two Ets binding cores within -86 bp to -77 bp and -78 bp to -69 bp of the mouse and human DYT1 gene, respectively. A single or a two base nucleotide alteration within the downstream Ets core resulted in approximately 90% (mouse) or 45-60% (human) drop in activity. Interestingly, a 3-bp distance increase between the two Ets cores dramatically decreased transcriptional activity which was partially restored when the distance was increased up to 10 bp. Ets-like dominant negatives confirmed the Ets factors as DYT1 transcriptional activators.

Indexed as

AnimalsBase SequenceBinding SitesCell LineDystonia Musculorum DeformansGene Expression RegulationHumansMiceMolecular ChaperonesMolecular Sequence DataMultigene FamilyProto-Oncogene Proteins c-etsRatsTourette SyndromeTrans-ActivatorsDyt1 protein, mouseMolecular ChaperonesProto-Oncogene Proteins c-etsTrans-Activators

Identifiers

PMID18466338
PMCPMC2668265
OpenAlexW2013079415

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.