Evidence map›Paper›PMID 18465878›Full record

ArticleBiochemistry2008

Structure and function of the sterol carrier protein-2 N-terminal presequence.

Gregory G Martin, Heather A Hostetler, Avery L McIntosh, Shane E Tichy, Brad J Williams, David H Russell, Jeremy M Berg, Thomas A Spencer, Judith Ball, Ann B Kier and 1 more

Erratum issuedAbstract read
In one paragraph

Article in Biochemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Impact ofJournal of lipid research · 2017
    Article
  7. Article
  8. Impact of dietary phytol on lipid metabolism in SCP2/SCPX/L-FABP null mice.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2017
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Impact of SCP-2/SCP-x gene ablation and dietary cholesterol on hepatic lipid accumulation.American journal of physiology. Gastrointestinal and liver physiology · 2015
    Article
  14. Article
  15. Article
  16. Ablating L-FABP in SCP-2/SCP-x null mice impairs bile acid metabolism and biliary HDL-cholesterol secretion.American journal of physiology. Gastrointestinal and liver physiology · 2014
    Article
  17. Human FABP1 T94A variant impacts fatty acid metabolism and PPAR-α activation in cultured human female hepatocytes.American journal of physiology. Gastrointestinal and liver physiology · 2014
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

11 authors.

Gregory G MartinDepartment of Physiology and Pharmacology, Texas A&M University, TVMC, College Station, Texas 77843-4466, USA.
Heather A Hostetler
Avery L McIntosh
Shane E Tichy
Brad J Williams
David H Russell
Jeremy M Berg
Thomas A Spencer
Judith Ball
Ann B Kier
Friedhelm Schroeder

Funding

FATTY ACID BINDING PROTEINS-LIGAND SPECIFICITYR01DK041402 · NIDDK · UNIVERSITY OF CINCINNATI · PI SCHROEDER, FRIEDHELM · 1989 to 2010
$4.4M
ASYMMETRIC DISTRIBUTION OF CHOLESTEROL IN MEMBRANESR01GM031651 · NIGMS · UNIVERSITY OF MISSOURI-COLUMBIA · PI SCHROEDER, FRIEDHELM · 1985 to 2010
$3.4M
Transport and Lipid Interactions of a Novel EnterotoxinR01GM062326 · NIGMS · TEXAS A&M UNIVERSITY SYSTEM · PI BALL, JUDITH MARCHAND · 2001 to 2005
$1.2M
Protein structural mediation of molecular recognition processesZ01DK036172 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI BERG, JEREMY · 2007 to 2008
$1.1M
The role of long chain acyl-CoAs in nuclear receptor regulationR00DK077573 · NIDDK · WRIGHT STATE UNIVERSITY · PI HOSTETLER, HEATHER A · 2009 to 2011
$747k
The role of long chain acyl-CoAs in nuclear receptor regulationK99DK077573 · NIDDK · TEXAS A&M AGRILIFE RESEARCH · PI HOSTETLER, HEATHER A · 2007 to 2008
$179k
NIDDK NIH HHS DK077573NIDDK NIH HHS DK41402NIDDK NIH HHS K99 DK077573NIDDK NIH HHS R00 DK077573NIDDK NIH HHS R01 DK041402NIGMS NIH HHS GM31651NIGMS NIH HHS GM63236NIGMS NIH HHS R01 GM031651NIGMS NIH HHS R01 GM062326
6 · The paper itself

Abstract

Although sterol carrier protein-2 (SCP-2) is encoded as a precursor protein (proSCP-2), little is known regarding the structure and function of the 20-amino acid N-terminal presequence. As shown herein, the presequence contains significant secondary structure and alters SCP-2: (i) secondary structure (CD), (ii) tertiary structure (aqueous exposure of Trp shown by UV absorbance, fluorescence, and fluorescence quenching), (iii) ligand binding site [Trp response to ligands, peptide cross-linked by photoactivatable free cholesterol (FCBP)], (iv) selectivity for interaction with anionic phospholipid-rich membranes, (v) interaction with a peroxisomal import protein [FRET studies of Pex5p(C) binding], the N-terminal presequence increased SCP-2's affinity for Pex5p(C) by 10-fold, and (vi) intracellular targeting in living and fixed cells (confocal microscopy). Nearly 5-fold more SCP-2 than proSCP-2 colocalized with plasma membrane lipid rafts and caveolae (AF488-CTB); 2.8-fold more SCP-2 than proSCP-2 colocalized with a mitochondrial marker (Mitotracker), but nearly 2-fold less SCP-2 than proSCP-2 colocalized with peroxisomes (AF488 antibody to PMP70). These data indicate the importance of the N-terminal presequence in regulating SCP-2 structure, cholesterol localization within the ligand binding site, membrane association, and, potentially, intracellular targeting.

Indexed as

Binding SitesCarrier ProteinsFluorescence Resonance Energy TransferHumansLigandsProtein PrecursorsProtein Structure, SecondaryRecombinant ProteinsSpectrometry, FluorescenceStructure-Activity RelationshipTryptophanCarrier ProteinsLigandsProtein PrecursorsRecombinant Proteinssterol carrier proteinsTryptophan

Identifiers

PMID18465878
PMCPMC2474712

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.