Evidence map›Paper›PMID 18465210›Full record

ArticleCell stress & chaperones2008

An animal model to evaluate the function and regulation of the adaptively evolving stress protein SEP53 in oesophageal bile damage responses.

Lenny Nelson, Susan Anderson, Alan L Archibald, Susan Rhind, Zen H Lu, Alison Condie, Neal McIntyre, Jill Thompson, Rudolf Nenutil, Borek Vojtesek and 3 more

Open access · greenAbstract read
In one paragraph

Article in Cell stress & chaperones, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Lenny NelsonCRUK p53 Signal Transduction Group, University of Edinburgh, South Crewe Road, Edinburgh, UK.
Susan Anderson
Alan L Archibald
Susan Rhind
Zen H Lu
Alison Condie
Neal McIntyre
Jill Thompson
Rudolf Nenutil
Borek Vojtesek
C Bruce A Whitelaw
Tom J Little
Ted Hupp
University of Edinburgh · GBMasaryk Memorial Cancer Institute · CZNIHR Wellcome Trust Southampton Clinical Research Facility · GBRoslin Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/D/05191130Biotechnology and Biological Sciences Research Council BBS/E/D/05251442Biotechnology and Biological Sciences Research Council BBS/E/D/05251443Biotechnology and Biological Sciences Research Council BBS/E/D/05251444Biotechnology and Biological Sciences Research Council BBS/E/D/05251445Biotechnology and Biological Sciences Research Council BBS/E/R/00000684Cancer Research UKWellcome Trust 079235
6 · The paper itself

Abstract

Squamous epithelium in mammals has evolved an atypical stress response involving down-regulation of the classic HSP70 protein and induction of sets of proteins including one named SEP53. This atypical stress response might be due to the unusual environmental pressures placed on squamous tissue. In fact, SEP53 plays a role as an anti-apoptotic factor in response to DNA damage induced by deoxycholic acid stresses implicated in oesophageal reflux disease. SEP53 also has a genetic signature characteristic of an adaptively and rapidly evolving gene, and this observation has been used to imply a role for SEP53 in immunity. Physiological models of squamous tissue are required to further define the regulation and function of SEP53. We examined whether porcine squamous epithelium would be a good model to study SEP53, since this animal suffers from a bile-reflux disease in squamous oesophageal tissue. We have (1) cloned and sequenced the porcine SEP53 locus from porcine bacterial artificial chromosome genomic DNA, (2) confirmed the strikingly divergent nature of the C-terminal portion of the SEP53 gene amongst mammals, (3) discovered that a function of the conserved N-terminal domain of the gene is to maintain cytoplasmic localisation, and (4) examined SEP53 expression in normal and diseased porcine pars oesophagea. SEP53 expression in porcine tissue was relatively confined to gastric squamous epithelium, consistent with its expression in normal human squamous epithelium. Immunohistochemical staining for SEP53 protein in normal and damaged pars oesophagea demonstrated significant stabilisation of SEP53 protein in the injured tissue. These results suggest that porcine squamous epithelium would be a robust physiological model to examine the evolution and function of the SEP53 stress pathway in modulating stress-induced responses in squamous tissue.

Indexed as

Disease Models, AnimalAmino Acid SequenceAnimalsBileCell Line, TumorEpitheliumEsophagusHumansMembrane ProteinsMolecular Sequence DataNeoplasm ProteinsSequence AlignmentSequence Homology, Amino AcidSwineCRNN protein, humanMembrane ProteinsNeoplasm Proteins

Identifiers

PMID18465210
PMCPMC2673944
OpenAlexW2154944283

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.