Evidence map›Paper›PMID 18465111›Full record

ArticleJournal of neurology2008

Gene expression in human peripheral blood mononuclear cells upon acute ischemic stroke.

C Grond-Ginsbach, M Hummel, T Wiest, S Horstmann, K Pfleger, M Hergenhahn, M Hollstein, U Mansmann, A J Grau, S Wagner

Abstract read
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In one paragraph

Article in Journal of neurology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
5.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 59 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Acute Stroke Biomarkers: Are We There Yet?Frontiers in neurology · 2021
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Personalized Analysis by Validation of Monte Carlo for Application of Pathways in Cardioembolic Stroke.Medical science monitor : international medical journal of experimental and clinical research · 2017
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Ligand-specific conformational change of the G-protein-coupled receptor ALX/FPR2 determines proresolving functional responses.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  16. Article
  17. Article
  18. Article
  19. Molecular markers and mechanisms of stroke: RNA studies of blood in animals and humans.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2011
    Review
  20. The role of the blood transcriptome in innate inflammation and stroke.Annals of the New York Academy of Sciences · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

C Grond-GinsbachDept. of Neurology, University of Heidelberg, Im Neuenheimer Feld 400, 69120 Heidelberg, Germany. Caspar_Grond-Ginsbach@med.uni-heidelberg.de
M Hummel
T Wiest
S Horstmann
K Pfleger
M Hergenhahn
M Hollstein
U Mansmann
A J Grau
S Wagner
Heidelberg University · DEHeidelberg University · USLudwig-Maximilians-Universität München · DEGerman Cancer Research Center · DEKlinikum Ludwigshafen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

background and purposeIschemic stroke provokes a systemic inflammatory response. The purpose of this study was to characterize this response on the gene expression level in circulating mononuclear leukocytes from acute ischemic stroke (AIS) patients.

methodsRNA from peripheral blood mononuclear cells (PBMCs) of AIS patients (24 + 2 hours after onset of symptoms) was analyzed with Affymetrix U133A GeneChips using a pooled design. We compared the gene expression signature from AIS patients (n = 20), stroke survivors (n = 15), patients with acute traumatic brain injury (ATBI, n = 15) and healthy control subjects without vascular risk factors (n = 15).

resultsExpression levels of 9682 probe sets with present calls on each GeneChip were compared. Between AIS patients and stroke survivors or between AIS patients and ATBI patients there were no significant differences in expression values of single genes after correction for multiple testing. However, comparison of the PBMC expression profiles from AIS patients and healthy subjects revealed significantly different expression (p = 0.012) of a single probe set, specific for phosphodiesterase 4 D (PDE4D). In order to detect modest expression differences in multiple genes with a presumed cumulative effect we studied the gene expression of functional groups of genes by global statistical tests. Analysis of 11 gene groups revealed differential expression between AIS patients and healthy subjects for genes involved in the inflammatory response (GeneOntology GO:0006954). Genes encoding the N-formyl peptide receptor-like 1 (FPRL1), interleukin-1 receptor antagonist (IL1RN) and complement component 3a receptor 1 (C3AR1) contributed most to the observed difference.

conclusionsThis transcriptome analysis did not identify significant changes between circulating mononuclear cells from AIS patients 24 hours after stroke and closely matched stroke survivors. However, comparing AIS patients with healthy control subjects revealed measurable differences in PDE4D and in inflammatory response genes when considered as a set.

Indexed as

Acute DiseaseAgedBrain IschemiaCyclic Nucleotide Phosphodiesterases, Type 4FemaleGene ExpressionGene Expression ProfilingGenetic MarkersHumansInflammationInterleukin 1 Receptor Antagonist ProteinLeukocytes, MononuclearMaleMiddle AgedOligonucleotide Array Sequence AnalysisReceptors, Complementcomplement C3a receptorCyclic Nucleotide Phosphodiesterases, Type 4FPR2 protein, humanGenetic MarkersIL1RN protein, humanInterleukin 1 Receptor Antagonist ProteinReceptors, ComplementReceptors, Formyl PeptideReceptors, Lipoxin

Identifiers

PMID18465111
OpenAlexW2009475451

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.