Evidence map›Paper›PMID 18462347›Full record

ArticleImmunology2008

Altered editing in cyclic nucleotide phosphodiesterase 8A1 gene transcripts of systemic lupus erythematosus T lymphocytes.

Robert J Orlowski, Kenneth S O'Rourke, Irene Olorenshaw, Gregory A Hawkins, Stefan Maas, Dama Laxminarayana

Open access · bronzeAbstract read
In one paragraph

Article in Immunology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. The Role of PDE8 in T Cell Recruitment and Function in Inflammation.Frontiers in cell and developmental biology · 2021
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Molecular insights into systemic lupus erythematosus pathogenesis.Clinical medicine insights. Pathology · 2014
    Article
  16. Review
  17. When you can't trust the DNA: RNA editing changes transcript sequences.Cellular and molecular life sciences : CMLS · 2011
    Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Robert J OrlowskiDepartment of Internal Medicine, Wake Forest University School of Medicine, Winston-Salem, NC 27157, USA.
Kenneth S O'Rourke
Irene Olorenshaw
Gregory A Hawkins
Stefan Maas
Dama Laxminarayana
Wake Forest University · USLehigh University · US

Funding

WORKER PROTECTION AGAINST AIRBORNE INFLUENZA - A PILOT STUDYM01RR007122 · NCRR · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI HUNDLEY, WILLIAM GREGORY · 1992 to 2010
$35.2M
Mutations in PKA gene transcripts of lupus T cellsR01AR048628 · NIAMS · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI LAXMINARAYANA, DAMA · 2003 to 2007
$966k
NCRR NIH HHS M01 RR007122NCRR NIH HHS M01 RR07122NIAMS NIH HHS R01 AR048628NIAMS NIH HHS R01-AR48628
6 · The paper itself

Abstract

The aetiopathogenesis of the abnormal immune response in systemic lupus erythematosus (SLE) remains incompletely understood. We and other investigators demonstrated altered expression of adenosine deaminase that act on RNA (ADAR) genes in SLE patients. Based on this information, we hypothesize that the altered expression and function of ADAR enzymes is a mechanism for the immunopathogenesis of SLE. ADARs edit gene transcripts through site-specific conversion of adenosine to inosine by hydrolytic deamination at C6 of the adenosine. Thirteen SLE subjects and eight healthy controls were studied. We assessed the role of ADAR enzymes in editing of PDE8A1 gene transcripts of normal and SLE T cells. These studies demonstrated the occurrence of ADAR-catalysed altered and site-selective editing profile of specific sites in the PDE8A1 gene transcripts of normal and SLE T cells. Two hot spots for A to I editing were observed in the PDE8A1 transcripts of normal and SLE T cells. A fundamental finding of this study is A to I hypo-editing followed by up-regulation of PDE8A1 transcripts in SLE T cells. These results are confirmed by analysing PDE8A1 transcripts of normal T cells activated with type I interferon-alpha. It is proposed that, the altered expression of ADAR enzymes tilt the balance of editing machinery and alter editing in SLE transcriptome. Such altered editing may contribute to the modulation of gene regulation and ultimately, immune functions in SLE and play an important role in the initiation and propagation of SLE pathogenesis.

Indexed as

3',5'-Cyclic-AMP PhosphodiesterasesAdultBase SequenceCells, CulturedFemaleHumansImmunophenotypingInterferon-alphaLupus Erythematosus, SystemicLymphocyte ActivationMaleMiddle AgedMolecular Sequence DataMutationPolymerase Chain ReactionPolymorphism, Single Nucleotide3',5'-Cyclic-AMP PhosphodiesterasesInterferon-alphaPDE8A protein, humanRNA, Messenger

Identifiers

PMID18462347
PMCPMC2669144
OpenAlexW2009270106

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.