Evidence map›Paper›PMID 18462083›Full record

Trial reportAIDS research and human retroviruses2008

Genotypic susceptibility scores and HIV type 1 RNA responses in treatment-experienced subjects with HIV type 1 infection.

Jeffrey A Anderson, Hongyu Jiang, Xiao Ding, Leslie Petch, Terri Journigan, Susan A Fiscus, Richard Haubrich, David Katzenstein, Ronald Swanstrom, Roy M Gulick and 1 more

Open access · greenAbstract readClinical TrialComparative StudyMulticenter Study
In one paragraph

Trial report in AIDS research and human retroviruses, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Jeffrey A AndersonUNC Center for AIDS Research, University of North Carolina, Chapel Hill, North Carolina 27759, USA.
Hongyu Jiang
Xiao Ding
Leslie Petch
Terri Journigan
Susan A Fiscus
Richard Haubrich
David Katzenstein
Ronald Swanstrom
Roy M Gulick
AIDS Clinical Trials Group Study 359 Protocol Team
Harvard University · USCornell University · USStanford Medicine · USUniversity of California, San Diego · US

Funding

VirologyP30AI036214 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SUSAN JANET LITTLE · 1994 to 2026
$78.4M
STATISTICAL AND DATA MANAGEMENT CENTERU01AI038855 · NIAID · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI HUGHES, MICHAEL DAVID · 1996 to 2006
$78.1M
CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR024996 · NCRR · WEILL MEDICAL COLL OF CORNELL UNIV · PI IMPERATO-MCGINLEY, JULIANNE L · 2007 to 2011
$49.6M
VEGF VECTOR TO ISCHEMIC MYOCARDIUM W/DIFFUSE CORONARY DISEASEM01RR000047 · NCRR · WEILL MEDICAL COLL OF CORNELL UNIV · PI DADHANIA, DARSHANA · 1985 to 2007
$36.4M
XOLAIR IN SUBJECTS WITH MODERATE TO SEVERE ATOPIC DERMATITIS WITH FOOD ALLERGYM01RR000070 · NCRR · STANFORD UNIVERSITY · PI VAN MEURS, KRISA PAGE · 1985 to 2008
$32.4M
UCSD Department of Medicine HIV/AIDS Clinical Trials UnitU01AI069432 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BENSON, CONSTANCE ANN · 2007 to 2011
$19.3M
WOMEN'S HEALTH AGENDAU01AI025868 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ERON, JOSEPH J. · 1987 to 2006
$14.9M
WOMEN'S HEALTH AGENDAU01AI027670 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BENSON, CONSTANCE ANN · 1988 to 2006
$13.7M
WOMEN'S HEALTH AGENDAU01AI027666 · NIAID · STANFORD UNIVERSITY · PI ZOLOPA, ANDREW RICHARD · 1988 to 2006
$11.4M
Improving Antiretroviral Management for HIVK24AI064086 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAUBRICH, RICHARD H · 2006 to 2015
$1.8M
Antiretroviral Therapy for HIV-Infected PatientsK24AI051966 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI GULICK, ROY M. · 2003 to 2012
$1.6M
UNC CENTER FOR AIDS RESEARCHP30HD037260 · NICHD · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI SWANSTROM, RONALD I · 1998 to 2000
$1.2M
NCRR NIH HHS M01 RR000047NCRR NIH HHS M01 RR000070NCRR NIH HHS M01RR00070NCRR NIH HHS RR00047NCRR NIH HHS UL1 RR024996NCRR NIH HHS UL1-RR24996NIAID NIH HHS AI064086NIAID NIH HHS AI25868NIAID NIH HHS AI27666NIAID NIH HHS AI27670NIAID NIH HHS AI36214NIAID NIH HHS AI-38855NIAID NIH HHS K24 AI051966NIAID NIH HHS K24 AI064086NIAID NIH HHS P30 AI036214NIAID NIH HHS U01 AI025868NIAID NIH HHS U01 AI027666NIAID NIH HHS U01 AI027670NIAID NIH HHS U01 AI038855NIAID NIH HHS U01 AI069432NICHD NIH HHS P30 HD037260PHS HHS I-6836PHS HHS I69419
6 · The paper itself

Abstract

This study compared the role of genotypic susceptibility scores (GSS) as a predictor of virologic response in a group (n = 234) of HIV-infected, protease inhibitor (PI)-experienced subjects. Two scoring methods [discrete genotypic susceptibility score (dGSS) and continuous genotypic susceptibility score (cGSS)] were developed. Each drug in the subject's regimen was given a binary susceptibility score using Stanford inferred drug resistance scores to calculate the dGSS. In contrast to the dGSS, the cGSS model was designed to reflect partial susceptibility to a drug. Both GSS were independent predictors of week 16 virologic response. We also compared the GSS to a phenotypic susceptibility score (PSS) model on a subset of subjects that had both GSS and PSS performed, and found that both models were predictive of virologic response. Genotypic analyses at enrollment showed that subjects who were virologic nonresponders at week 16 revealed enrichment of several mutated codons associated with nucleoside reverse transcriptase inhibitors (NRTI) (codons 67, 69, 70, 118, 215, and 219) or PI resistance (codons 10, 24, 71, 73, and 88) compared to subjects who were virologic responders. Regression analyses revealed that protease mutations at codons 24 and 90 were most predictive of poor virologic response, whereas mutations at 82 were associated with enhanced virologic response. Certain NNRTI-associated mutations, such as K103N, were rapidly selected in the absence of NRTIs. These data indicate that GSS may be a useful tool in selecting drug regimens in HIV-1-infected subjects to maximize virologic response and improve treatment outcomes.

Indexed as

Anti-HIV AgentsAntiretroviral Therapy, Highly ActiveCodonDisease ProgressionDrug Resistance, ViralGenes, polGenetic MarkersGenotypeHIV-1HIV InfectionsHIV ProteaseHIV Protease InhibitorsHumansMutationPredictive Value of TestsRNA, ViralAnti-HIV AgentsCodonGenetic MarkersHIV ProteaseHIV Protease InhibitorsRNA, Viral

Identifiers

PMID18462083
PMCPMC2928289
OpenAlexW2016572755

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.