Evidence map›Paper›PMID 18452895›Full record

ArticleBrain research2008

Gene profiling the response to repeated cocaine self-administration in dorsal striatum: a focus on circadian genes.

Wendy J Lynch, Matthew J Girgenti, Florence J Breslin, Samuel S Newton, Jane R Taylor

Open access · greenAbstract read
In one paragraph

Article in Brain research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 86 citations in OpenAlex.

  1. Review
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  8. Dopamine D2 receptor signaling in the brain modulates circadian liver metabolomic profiles.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. Article
  10. Review
  11. Article
  12. The Brain's Reward System in Health and Disease.Advances in experimental medicine and biology · 2021
    Article
  13. How Psychoactive Drugs and the Circadian Clock Are Enlightening One Another.Advances in experimental medicine and biology · 2021
    Article
  14. Article
  15. Article
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Wendy J LynchDepartment of Psychiatry and Neurobehavioral Sciences, University of Virginia, Charlottesville, VA, USA. wlynch@virginia.edu
Matthew J Girgenti
Florence J Breslin
Samuel S Newton
Jane R Taylor
Yale University · USUniversity of Virginia · US

Funding

Yale Microarray Center for Research the Nervous SystemU24NS051869 · NINDS · YALE UNIVERSITY · PI MANE, SHRIKANT M · 2005 to 2009
$6.9M
COGNITIVE DYSFUNCTION AFTER CHRONIC PCP, THC AND COCAINER01DA011717 · NIDA · YALE UNIVERSITY · PI TAYLOR, JANE R · 1998 to 2014
$3.4M
Sex, hormones and cocaine self-administrationR03DA018978 · NIDA · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI LYNCH, WENDY JEAN · 2005 to 2006
$150k
NIAMS NIH HHS AR049469NIDA NIH HHS L30 DA018493NIDA NIH HHS R01 DA011717NIDA NIH HHS R01 DA11717NIDA NIH HHS R03 DA018978NINDS NIH HHS U24 NS051869NINDS NIH HHS U24 NS051869-01
6 · The paper itself

Abstract

Alterations in gene expression in the dorsal striatum caused by chronic cocaine exposure have been implicated in the long-term behavioral changes associated with cocaine addiction. To gain further insight into the molecular alterations that occur as a result of cocaine self-administration, we conducted a microarray analysis of gene expression followed by bioinformatic gene network analysis that allowed us to identify adaptations at the level of gene expression as well as into interconnected networks. Changes in gene expression were examined in the dorsal striatum of rats 1 day after they had self-administered cocaine for 7 days under a 24-h access, discrete trial paradigm (averaging 98 mg/kg/day). Here we report the regulation of the circadian genes Clock, Bmal1, Cryptochrome1, Period2, as well as several genes that are regulated by/associated with the circadian system (i.e., early growth response 1, dynorphin). We also observed regulation of other relevant genes (i.e., Nur77, beta catenin). These changes were then linked to curated pathways and formulated networks which identified circadian rhythm processes as affected by cocaine self-administration. These data strongly suggest involvement of circadian-associated genes in the brain's response to cocaine and may contribute to an understanding of addictive behavior including disruptions in sleep and circadian rhythmicity.

Indexed as

AnimalsBehavior, AddictiveBehavior, AnimalCircadian RhythmCocaineCorpus StriatumDopamine Uptake InhibitorsGene ExpressionGene Expression ProfilingMaleOligonucleotide Array Sequence AnalysisRatsRats, Sprague-DawleySelf AdministrationTime FactorsCocaineDopamine Uptake Inhibitors

Identifiers

PMID18452895
PMCPMC2494701
OpenAlexW2014181599

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.