Evidence map›Paper›PMID 18451228›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2008

Use of yeast-secreted in vivo biotinylated recombinant antibodies (Biobodies) in bead-based ELISA.

Nathalie Scholler, Kimberly A Lowe, Lindsay A Bergan, Archana V Kampani, Vivian Ng, Robin M Forrest, Jason D Thorpe, Jenny A Gross, Barbara M Garvik, Ronny Drapkin and 2 more

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

  1. Trial
  2. Review
  3. Review
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  5. Article
  6. Human epididymis protein 4 expression positively correlated with miR-21 and served as a prognostic indicator in ovarian cancer.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
  7. Article
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  9. HE4 (WFDC2) Promotes Tumor Growth in Endometrial Cancer Cell Lines.International journal of molecular sciences · 2013
    Article
  10. Article
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  12. Article
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  15. Article
  16. HE4 as a biomarker for ovarian and endometrial cancer management.Expert review of molecular diagnostics · 2009
    Review
  17. Influence of ovarian cancer risk status on the diagnostic performance of the serum biomarkers mesothelin, HE4, and CA125.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2009
    Article
  18. Effects of personal characteristics on serum CA125, mesothelin, and HE4 levels in healthy postmenopausal women at high-risk for ovarian cancer.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2008
    Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Nathalie SchollerSchool of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 96104-6069, USA. naths@mail.med.upenn.edu
Kimberly A Lowe
Lindsay A Bergan
Archana V Kampani
Vivian Ng
Robin M Forrest
Jason D Thorpe
Jenny A Gross
Barbara M Garvik
Ronny Drapkin
Garnet L Anderson
Nicole Urban
Dana-Farber Cancer Institute · USFred Hutch Cancer Center · USHarvard University · USUniversity of Pennsylvania · US

Funding

Vaccinating against IGFBP-2 to prevent ovarian cancer relapseP50CA083636 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI DRESCHER, CHARLES, URBAN, NICOLE DENISE · 1999 to 2015
$35.1M
QOL EFFECTS OF OVARIAN CA RISK EDUCATION AND SCREENINGR01CA075494 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI URBAN, NICOLE D. · 1997 to 2000
$445k
NCI NIH HHS P50 CA083636NCI NIH HHS P50 CA83636NCI NIH HHS R01 CA 75494
6 · The paper itself

Abstract

purposeTo measure circulating antigens, sandwich ELISA assays require two complementary affinity reagents. Mouse monoclonal antibodies (mAb) and polyclonal antibodies (pAb) are commonly used, but because their production is lengthy and costly, recombinant antibodies are emerging as an attractive alternative. EXPERIMENTAL

designWe developed a new class of recombinant antibodies called biobodies (Bb) and compared them to mAb for use in serodiagnosis. Bbs were secreted biotinylated in vivo by diploid yeast and used as affinity reagents after Ni purification. Bead-based assays for HE4 and mesothelin were developed using Bbs in combination with pAbs (Bb/pAb assays). To assess precision, reproducibility studies were done using four runs of 16 replicates at six analyte levels for each marker. Pearson correlations and receiver-operator characteristic analyses were done in 214 patient serum samples to directly compare the Bb/pAb assays to mAb assays. Diagnostic performance of the Bb/pAb assay was further assessed in an expanded set of 336 ovarian cancer cases and controls.

resultsOn average across analyte levels, Bb/pAb assays yielded within-run and between-run coefficients of variations of 11.7 and 23.8, respectively, for HE4 and 14.0 and 14.5, respectively, for mesothelin. In the subset (n = 214), Pearson correlations of 0.95 for HE4 and 0.92 for mesothelin were observed between mAb and Bb/pAb assays. The area under the curves for the mAb and Bb/pAb assays were not significantly different for HE4 (0.88 and 0.84, respectively; P = 0.20) or mesothelin (0.74 and 0.72, respectively; P = 0.38).

conclusionYeast-secreted Bbs can be used reliably in cost-effective yet highly sensitive bead-based assays for use in large validation studies.

Indexed as

AdultAgedAged, 80 and overAntibodiesAntibodies, Monoclonalbeta-DefensinsBiotinylationEnzyme-Linked Immunosorbent AssayEpididymal Secretory ProteinsFemaleGPI-Linked ProteinsHumansMembrane GlycoproteinsMesothelinMiddle AgedOvarian NeoplasmsAntibodiesAntibodies, Monoclonalbeta-DefensinsDEFB126 protein, humanEpididymal Secretory ProteinsGPI-Linked ProteinsMembrane GlycoproteinsMesothelinMsln protein, mouseRecombinant Fusion Proteins

Identifiers

PMID18451228
PMCPMC2744596
OpenAlexW2158490288

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.