Evidence map›Paper›PMID 18450757›Full record

ArticleThe Journal of biological chemistry2008

Rab35 and its GAP EPI64C in T cells regulate receptor recycling and immunological synapse formation.

Genaro Patino-Lopez, Xiaoyun Dong, Khadija Ben-Aissa, Kelsie M Bernot, Takashi Itoh, Mitsunori Fukuda, Michael J Kruhlak, Lawrence E Samelson, Stephen Shaw

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 136 citations in OpenAlex.

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  19. Microclusters as T Cell Signaling Hubs: Structure, Kinetics, and Regulation.Frontiers in cell and developmental biology · 2020
    Review
  20. Review

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Genaro Patino-LopezExperimental Immunology Branch and Laboratory of Cellular and Molecular Biology, NCI, NIH, Bethesda, MD 20892, USA.
Xiaoyun Dong
Khadija Ben-Aissa
Kelsie M Bernot
Takashi Itoh
Mitsunori Fukuda
Michael J Kruhlak
Lawrence E Samelson
Stephen Shaw
National Institutes of Health · USFukuda Denshi (Japan) · JPTohoku University · JP

Funding

Biochemical Basis of T Cell ActivationZIABC010304 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SAMELSON, LAWRENCE · 2009 to 2025
$36.3M
Application of Flow Cytometry to Cell BiologyZICBC009255 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI CROSSMAN, ASSIATU · 2009 to 2025
$26.4M
EIB Microscopy Core FacilityZICBC010915 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI WISNIEWSKI, JAN · 2009 to 2025
$6.1M
APPLICATION OF FLOW CYTOMETRY TO CELL BIOLOGYZ01BC009255 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SHARROW, SUSAN · 1996 to 2008
$3.0M
BIOCHEMICAL BASIS OF T CELL ACTIVATIONZ01BC010304 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SAMELSON, LAWRENCE E · 1999 to 2008
$2.6M
MECHANISMS OF CELLULAR IMMUNE RESPONSESZ01BC009257 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SHAW, JAMES · 1996 to 2008
$2.2M
Molecular architecture of lymphocyte cortexZIABC010993 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SHAW, JAMES · 2009 to 2012
$1.1M
Molecular architecture of lymphocyte cortexZ01BC010993 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SHAW, JAMES · 2008 to 2008
$383k
Mechanisms of Cellular Immune ResponsesZIABC009257 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SHAW, JAMES · 2009 to 2012
$377k
EIB Microscopy Core FacilityZ01BC010915 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KRUHLAK, MICHAEL · 2008 to 2008
$334k
Intramural NIH HHS
6 · The paper itself

Abstract

Upon antigen recognition, T-cell receptor (TCR/CD3) and other signaling molecules become enriched in a specialized contact site between the T cell and antigen-presenting cell, i.e. the immunological synapse (IS). Enrichment occurs via mechanisms that include polarized secretion from recycling endosomes, but the Rabs and RabGAPs that regulate this are unknown. EPI64C (TBC1D10C) is an uncharacterized candidate RabGAP we identified by mass spectrometry as abundant in human peripheral blood T cells that is preferentially expressed in hematopoietic cells. EPI64C is a Rab35-GAP based both on in vitro Rab35-specific GAP activity and findings in transfection assays. EPI64C and Rab35 dominant negative (DN) constructs each impaired transferrin export from a recycling pathway in Jurkat T-cells and induced large vacuoles marked by transferrin receptor, TCR, and SNAREs implicated in TCR-polarized secretion. Rab35 localized to the plasma membrane and to intracellular vesicles where it substantially colocalized with TfR and with TCR. Rab35 was strongly recruited to the IS. Conjugate formation was impaired by transfection with Rab35-DN or EPI64C and by EPI64C knock down. TCR enrichment at the IS was impaired by Rab35-DN. Thus, EPI64C and Rab35 regulate a recycling pathway in T cells and contribute to IS formation, most likely by participating in TCR transport to the IS.

Indexed as

Gene Expression RegulationEndosomesGTPase-Activating ProteinsHumansImmune SystemJurkat CellsMicroscopy, ConfocalModels, Biologicalrab GTP-Binding ProteinsRNA InterferenceSignal TransductionSynapsesT-LymphocytesTransfectionGTPase-Activating ProteinsRAB35 protein, humanrab GTP-Binding ProteinsTBC1D10A protein, human

Identifiers

PMID18450757
PMCPMC2440627
OpenAlexW1967585280

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.