Evidence map›Paper›PMID 18443125›Full record

Trial reportAntimicrobial agents and chemotherapy2008

Suppression of dualtropic human immunodeficiency virus type 1 by the CXCR4 antagonist AMD3100 is associated with efficiency of CXCR4 use and baseline virus composition.

Signe Fransen, Gary Bridger, Jeannette M Whitcomb, Jonathan Toma, Eric Stawiski, Neil Parkin, Christos J Petropoulos, Wei Huang

Abstract readClinical Trial, Phase IClinical Trial, Phase IIMulticenter Study
In one paragraph

Trial report in Antimicrobial agents and chemotherapy, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Trial
  2. Review
  3. Article
  4. Zinc-finger nuclease editing of human cxcr4 promotes HIV-1 CD4(+) T cell resistance and enrichment.Molecular therapy : the journal of the American Society of Gene Therapy · 2012
    Article
  5. Article
  6. Article
  7. How HIV changes its tropism: evolution and adaptation?Current opinion in HIV and AIDS · 2009
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Signe FransenMonogram Biosciences, South San Francisco, CA 94080, USA.
Gary Bridger
Jeannette M Whitcomb
Jonathan Toma
Eric Stawiski
Neil Parkin
Christos J Petropoulos
Wei Huang

Funding

NOVEL ASSAYS FOR MEASURING THE INHIBITION OF VIRUS ENTRYR44AI048990 · NIAID · MONOGRAM BIOSCIENCES, INC. · PI PETROPOULOS, CHRISTOS J · 2003 to 2005
$2.6M
NIAID NIH HHS R44 AI048990NIAID NIH HHS R44-AI048990
6 · The paper itself

Abstract

In a phase I/II evaluation of the CXCR4 antagonist AMD3100, human immunodeficiency virus RNA levels were significantly reduced in a single study subject who harbored CXCR4 (X4)-tropic virus, but not in subjects who harbored either dual/mixed (DM)-tropic or CCR5 (R5)-tropic virus (C. W. Hendrix et al., J. Acquir. Immune Defic. Syndr. 37:1253-1262, 2004). In this study, we analyzed the envelope clones of DM-tropic virus in baseline and treated virus populations from 14 subjects. Ten subjects exhibited significant reductions in CXCR4-mediated infectivity after 10 days of AMD3100 therapy relative to baseline (X4 suppressor group), while four subjects had no reduction of CXCR4-mediated infectivity (X4 nonsuppressor group). The baseline viruses of the X4 suppressor group infected CXCR4-expressing cells less efficiently than those of the X4 nonsuppressor group. Clonal analysis indicated that the baseline viruses from the X4 suppressor group contained a higher proportion of R5-tropic variants mixed with CXCR4-using variants, while the X4 nonsuppressor group was enriched for CXCR4-using variants. AMD3100 suppressed X4-tropic variants in all subjects studied, but not all dualtropic variants. Furthermore, dualtropic variants that used CXCR4 efficiently were suppressed by AMD3100, while dualtropic variants that used CXCR4 poorly were not. This study demonstrated that AMD3100 has the ability to suppress both X4-tropic and certain dualtropic variants in vivo. The suppression of CXCR4-using variants by AMD3100 is dependent on both the tropism composition of the virus population and the efficiency of CXCR4 usage of individual variants.

Indexed as

Amino Acid SequenceAnti-HIV AgentsBenzylaminesCyclamsGenetic VariationHeterocyclic CompoundsHIV-1HIV Envelope Protein gp120HIV Envelope Protein gp160HIV InfectionsHumansMolecular Sequence DataPeptide FragmentsPhylogenyReceptors, CCR5Receptors, CXCR4Anti-HIV AgentsBenzylaminesCyclamsgp160 protein, Human immunodeficiency virus 1Heterocyclic CompoundsHIV Envelope Protein gp120HIV envelope protein gp120 (305-321)HIV Envelope Protein gp160Peptide FragmentsplerixaforReceptors, CCR5Receptors, CXCR4

Identifiers

PMID18443125
PMCPMC2443920

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.