Evidence map›Paper›PMID 18443038›Full record

ArticleMolecular and cellular biology2008

A T-to-G transversion at nucleotide -567 upstream of HBG2 in a GATA-1 binding motif is associated with elevated hemoglobin F.

Zhiyi Chen, Hong-Yuan Luo, Raveen K Basran, Tien-Huei Hsu, Daniel W H Mang, Lalana Nuntakarn, Cathy G Rosenfield, George P Patrinos, Ross C Hardison, Martin H Steinberg and 1 more

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 43 citations in OpenAlex.

  1. The Molecular Pathology of Non-Malignant Haematological Disease.British journal of biomedical science · 2026
    Review
  2. Review
  3. Article
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  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Engineering Globin Gene Expression.Molecular therapy. Methods & clinical development · 2019
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Zhiyi ChenCenter of Excellence in Sickle Cell Disease, Division of Hematology/Oncology, Department of Medicine, Boston University School of Medicine, Boston, Massachusetts 02118, USA.
Hong-Yuan Luo
Raveen K Basran
Tien-Huei Hsu
Daniel W H Mang
Lalana Nuntakarn
Cathy G Rosenfield
George P Patrinos
Ross C Hardison
Martin H Steinberg
David H K Chui
Boston University · USErasmus University Rotterdam · NLPennsylvania State University · USTufts Medical Center · US

Funding

Global Predictions and Tests of Erythroid RegulationR01DK065806 · NIDDK · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI BLOBEL, GERD A, CHIAROMONTE, FRANCESCA · 2004 to 2013
$5.3M
Genetic Modulation of HbF in Beta ThalassemiaR01DK069646 · NIDDK · BOSTON UNIVERSITY MEDICAL CAMPUS · PI CHUI, DAVID H K · 2005 to 2009
$2.9M
NHLBI NIH HHS 1U54 HL708819NIDDK NIH HHS R01 DK065806NIDDK NIH HHS R01 DK069646
6 · The paper itself

Abstract

Increased fetal hemoglobin (Hb F; alpha(2)gamma(2)) production in adults can ameliorate the clinical severity of sickle cell disease and beta-thalassemia major. Thus, understanding the regulation of gamma-globin gene expression and its silencing in adults has potential therapeutic implications. We studied a father and son in an Iranian-American family who had elevated Hb F levels and found a novel T-to-G transversion at nucleotide (nt) -567 of the HBG2 promoter. This mutation alters a GATA-1 binding motif to a GAGA sequence located within a previously identified silencing element. DNA-protein binding assays showed that the GATA motif of interest is capable of binding GATA-1 transcription factor in vitro and in vivo. Truncation analyses of the HBG2 promoter linked to a luciferase reporter gene revealed a negative regulatory activity present between nt -675 and -526. In addition, the T-to-G mutation at the GATA motif increased the promoter activity by two- to threefold in transiently transfected erythroid cell lines. The binding motif is uniquely conserved in simian primates with a fetal pattern of gamma-globin gene expression. These results suggest that the GATA motif under study has a functional role in silencing gamma-globin gene expression in adults. The T-to-G mutation in this motif disrupts GATA-1 binding and the associated repressor complex, abolishing its silencing effect and resulting in the up-regulation of gamma-globin gene expression in adults.

Indexed as

GuanineThymineAdolescentAnimalsBase SequenceCell Line, TumorChildFemaleFetal HemoglobinGATA1 Transcription FactorGenome, HumanGlobinsHumansMaleMiceMolecular Sequence DataFetal HemoglobinGATA1 protein, humanGATA1 Transcription FactorGlobinsGuanineNucleotidesThymine

Identifiers

PMID18443038
PMCPMC2447137
OpenAlexW2135136940

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.