Evidence map›Paper›PMID 18437087›Full record

ArticlePancreas2008

Small-interference RNA gene knockdown of pancreatitis-associated proteins in rat acute pancreatitis.

Yin-Yao Lin, Domenico Viterbo, Cathy M Mueller, Albert E Stanek, Tamar Smith-Norowitz, Hazel Drew, Raj Wadgaonkar, Michael E Zenilman, Martin H Bluth

Open access · greenAbstract read
In one paragraph

Article in Pancreas, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Mechanisms of interleukin-22's beneficial effects in acute pancreatitis.World journal of gastrointestinal pathophysiology · 2016
    Review
  3. Article
  4. Article
  5. Comparison of His and GST tagged versions of recombinant pancreatitis associated protein 2 in modulation of inflammatory responses.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2010
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Yin-Yao LinSUNY Downstate Medical Center, Brooklyn, NY 11203, USA.
Domenico Viterbo
Cathy M Mueller
Albert E Stanek
Tamar Smith-Norowitz
Hazel Drew
Raj Wadgaonkar
Michael E Zenilman
Martin H Bluth
SUNY Downstate Health Sciences University · US

Funding

PHYSIOLOGY OF PANCREATIC REGR01DK054511 · NIDDK · YESHIVA UNIVERSITY · PI ZENILMAN, MICHAEL E · 1998 to 2002
$531k
NIDDK NIH HHS R01 DK054511
6 · The paper itself

Abstract

objectivesPancreatitis-associated proteins (PAPs) are induced in acute pancreatitis and antisense-mediated gene knockdown of PAP decreased PAP gene expression and worsened pancreatitis. Here, we investigated the effect of a more stable inhibition of PAP using small-interference RNA gene knockdown in vitro and in an in vivo model of experimental pancreatitis.

methodsPancreatitis-associated protein-specific siRNA was administered to AR42J cell cultures or rats induced with pancreatitis. Controls included administration of scrambled siRNA or vehicle alone. After 24 hours, cells and pancreata were harvested and assessed for PAP (PAP 1, PAP 2, PAP 3) gene expression and pancreatitis severity.

resultsIn vitro, PAP protein, and mRNA levels were reduced (PAP 1, 76%; PAP 2, 8%; PAP 3, 24%) in cells treated with PAP siRNA. In vivo, PAP 1, and PAP 3 expressions were reduced (PAP 1, 36%; PAP 3, 66%) in siRNA-treated rats; there was no difference in PAP 2 isoform mRNA expression and serum protein levels. Serum amylase and lipase levels decreased (> or =50%) after administration of siRNA; interleukin (IL) 1beta, IL-4, and IL-6 increased, whereas C-reactive protein and tumor necrosis factor-alpha decreased when compared with vehicle control. Administration of PAP siRNA correlated with worsening histopathology.

conclusionssiRNA-mediated gene knockdown of PAP worsens pancreatitis. Differences in gene knockdown technology may provide different approaches to study gene function.

Indexed as

Gene DeletionAcute DiseaseAnimalsAntigens, NeoplasmBiomarkers, TumorCell LineFemaleLectins, C-TypePancreatitisPancreatitis-Associated ProteinsRatsRats, Sprague-DawleyReverse Transcriptase Polymerase Chain ReactionRNA, MessengerRNA, Small InterferingTaurocholic AcidAntigens, NeoplasmBiomarkers, TumorLectins, C-TypePancreatitis-Associated ProteinsREG3A protein, humanReg3a protein, ratReg3b protein, ratReg3g protein, ratRNA, MessengerRNA, Small InterferingTaurocholic Acid

Identifiers

PMID18437087
PMCPMC3151650
OpenAlexW2022192929

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.