Evidence map›Paper›PMID 18434596›Full record

ArticleMolecular biology of the cell2008

A Mep2-dependent transcriptional profile links permease function to gene expression during pseudohyphal growth in Saccharomyces cerevisiae.

Julian C Rutherford, Gordon Chua, Timothy Hughes, Maria E Cardenas, Joseph Heitman

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 52 citations in OpenAlex.

  1. Review
  2. Ammonia transporter RhBG initiates downstream signaling and functional responses by activating NFκB.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. Article
  4. Article
  5. Review
  6. Journal of fungi (Basel, Switzerland) · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. The lipid environment determines the activity of the Escherichia coli ammonium transporter AmtB.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  11. Review
  12. Nutrient and Stress Sensing in Pathogenic Yeasts.Frontiers in microbiology · 2019
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Julian C RutherfordDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC 27710, USA.
Gordon Chua
Timothy Hughes
Maria E Cardenas
Joseph Heitman
Duke University · USUniversity of Toronto · CA

Funding

ROLE OF CALCINEURIN IN C. NEOFORMANS MATING AND FRUITINGR01AI039115 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH · 1997 to 2025
$6.7M
Genetics of Cryptococcus sexual reproductionR37AI039115 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH · 2011 to 2020
$4.9M
Signaling mechanisms by the rapamycin target: Tor kinaseR01CA114107 · NCI · DUKE UNIVERSITY · PI CARDENAS-CORONA, MARIA E · 2005 to 2009
$1.3M
NCI NIH HHS CA114107NCI NIH HHS R01 CA114107NIAID NIH HHS AI39115NIAID NIH HHS R01 AI039115NIAID NIH HHS R37 AI039115
6 · The paper itself

Abstract

The ammonium permease Mep2 is required for the induction of pseudohyphal growth, a process in Saccharomyces cerevisiae that occurs in response to nutrient limitation. Mep2 has both a transport and a regulatory function, supporting models in which Mep2 acts as a sensor of ammonium availability. Potentially similar ammonium permease-dependent regulatory cascades operate in other fungi, and they may also function in animals via the homologous Rh proteins; however, little is known about the molecular mechanisms that mediate ammonium sensing. We show that Mep2 is localized to the cell surface during pseudohyphal growth, and it is required for both filamentous and invasive growth. Analysis of site-directed Mep2 mutants in residues lining the ammonia-conducting channel reveal separation of function alleles (transport and signaling defective; transport-proficient/signaling defective), indicating transport is necessary but not sufficient to sense ammonia. Furthermore, Mep2 overexpression enhances differentiation under normally repressive conditions and induces a transcriptional profile that is consistent with activation of the mitogen-activated protein (MAP) kinase pathway. This finding is supported by epistasis analysis establishing that the known role of the MAP kinase pathway in pseudohyphal growth is linked to Mep2 function. Together, these data strengthen the model that Mep2-like proteins are nutrient sensing transceptors that govern cellular differentiation.

Indexed as

Gene Expression Regulation, FungalTranscription, GeneticCation Transport ProteinsCell DifferentiationCell MembraneGreen Fluorescent ProteinsHaploidyMAP Kinase Signaling SystemMembrane Transport ProteinsMicroscopy, FluorescenceMutationNitrogenOligonucleotide Array Sequence AnalysisQuaternary Ammonium CompoundsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCation Transport ProteinsGreen Fluorescent ProteinsMembrane Transport ProteinsMEP2 protein, S cerevisiaeNitrogenQuaternary Ammonium CompoundsSaccharomyces cerevisiae Proteins

Identifiers

PMID18434596
PMCPMC2441671
OpenAlexW2122362671

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.