Evidence map›Paper›PMID 18434393›Full record

ArticleJournal of virology2008

A glycoconjugate antigen based on the recognition motif of a broadly neutralizing human immunodeficiency virus antibody, 2G12, is immunogenic but elicits antibodies unable to bind to the self glycans of gp120.

Rena D Astronomo, Hing-Ken Lee, Christopher N Scanlan, Ralph Pantophlet, Cheng-Yuan Huang, Ian A Wilson, Ola Blixt, Raymond A Dwek, Chi-Huey Wong, Dennis R Burton

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of virology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
4.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 108 citations in OpenAlex.

  1. Review
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  9. Novel Antiretroviral Structures from Marine Organisms.Molecules (Basel, Switzerland) · 2019
    Review
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  12. Review
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  19. Article
  20. Designing synthetic vaccines for HIV.Expert review of vaccines · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Rena D AstronomoThe Scripps Research Institute, Department of Immunology and Microbial Science, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
Hing-Ken Lee
Christopher N Scanlan
Ralph Pantophlet
Cheng-Yuan Huang
Ian A Wilson
Ola Blixt
Raymond A Dwek
Chi-Huey Wong
Dennis R Burton
Scripps Research Institute · USUniversity of Oxford · GB

Funding

HUMAN ANTIBODIES TO HIV-1 BY REPERTOIRE CLONINGR01AI033292 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI BURTON, DENNIS R. · 1992 to 2013
$5.9M
X-ray structures of HIV-1 neutralizing sitesR01GM046192 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI WILSON, IAN A · 1991 to 2008
$3.7M
ENZYMES IN ORGANIC SYNTHESISR37GM044154 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI WONG, CHI-HUEY · 2001 to 2008
$3.3M
HUMAN ANTIBODIES TO HIV-1 BY REPERTOIRE CLONINGR37AI033292 · NIAID · SCRIPPS RESEARCH INSTITUTE · PI BURTON, DENNIS R. · 1995 to 2004
$2.4M
IMMUNOFOCUSING TO A NEUTRALIZING EPITOPE ON GP120R01AI060425 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI BURTON, DENNIS R. · 2004 to 2007
$1.8M
ENZYMES IN ORGANIC SYNTHESISR01GM044154 · NIGMS · SCRIPPS RESEARCH INSTITUTE · PI WONG, CHI-HUEY · 1989 to 1999
–
NIAID NIH HHS AI060425NIAID NIH HHS AI33292NIAID NIH HHS R01 AI033292NIAID NIH HHS R01 AI060425NIAID NIH HHS R37 AI033292NIGMS NIH HHS GM44154NIGMS NIH HHS GM46192NIGMS NIH HHS R01 GM044154NIGMS NIH HHS R01 GM046192NIGMS NIH HHS R37 GM044154
6 · The paper itself

Abstract

The glycan shield of human immunodeficiency virus type 1 (HIV-1) gp120 contributes to viral evasion from humoral immune responses. However, the shield is recognized by the HIV-1 broadly neutralizing antibody (Ab), 2G12, at a relatively conserved cluster of oligomannose glycans. The discovery of 2G12 raises the possibility that a carbohydrate immunogen may be developed that could elicit 2G12-like neutralizing Abs and contribute to an AIDS vaccine. We have previously dissected the fine specificity of 2G12 and reported that the synthetic tetramannoside (Man(4)) that corresponds to the D1 arm of Man(9)GlcNAc(2) inhibits 2G12 binding to gp120 as efficiently as Man(9)GlcNAc(2) itself, indicating the potential use of Man(4) as a building block for creating immunogens. Here, we describe the development of neoglycoconjugates displaying variable copy numbers of Man(4) on bovine serum albumin (BSA) molecules by conjugation to Lys residues. The increased valency enhances the apparent affinity of 2G12 for Man(4) up to a limit which is achieved at approximately 10 copies per BSA molecule, beyond which no further enhancement is observed. Immunization of rabbits with BSA-(Man(4))(14) elicits significant serum Ab titers to Man(4). However, these Abs are unable to bind gp120. Further analysis reveals that the elicited Abs bind a variety of unbranched and, to a lesser extent, branched Man(9) derivatives but not natural N-linked oligomannose containing the chitobiose core. These results suggest that Abs can be readily elicited against the D1 arm; however, potential differences in the presentation of Man(4) on neoglycoconjugates, compared to glycoproteins, poses challenges for eliciting anti-mannose Abs capable of cross-reacting with gp120 and HIV-1.

Indexed as

Amino Acid MotifsAntibodies, MonoclonalAntigensBroadly Neutralizing AntibodiesEnzyme-Linked Immunosorbent AssayGlycoconjugatesHIV-1HIV AntibodiesHIV Envelope Protein gp120Microarray AnalysisOligosaccharidesPolysaccharides2G12 monoclonal antibodyAntibodies, MonoclonalAntigensBroadly Neutralizing AntibodiesGlycoconjugatesgp120 protein, Human immunodeficiency virus 1HIV AntibodiesHIV Envelope Protein gp120oligomannosideOligosaccharidesPolysaccharides

Identifiers

PMID18434393
PMCPMC2447108
OpenAlexW2130132011

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.