Evidence map›Paper›PMID 18433299›Full record

ArticleJournal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research2008

In vivo genome-wide expression study on human circulating B cells suggests a novel ESR1 and MAPK3 network for postmenopausal osteoporosis.

Peng Xiao, Yuan Chen, Hui Jiang, Yao-Zhong Liu, Feng Pan, Tie-Lin Yang, Zi-Hui Tang, Jennifer A Larsen, Joan M Lappe, Robert R Recker and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed, 3 pooled it
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 3 syntheses or guidelines pooled it, 86 citations in OpenAlex.

  1. P4 medicine and osteoporosis: a systematic review.Wiener klinische Wochenschrift · 2016
    Pooled it
  2. Pooled it
  3. IL21R and PTH may underlie variation of femoral neck bone mineral density as revealed by a genome-wide association study.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2010
    Pooled it
  4. A microbiota-substrate-metabolite-target network suggests AKT1-associated links between gut microbiota-derived metabolites and osteoporosis.International microbiology : the official journal of the Spanish Society for Microbiology · 2026
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  16. METTL14-mediated HOXA5 mJournal of orthopaedic translation · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Peng XiaoOsteoporosis Research Center and Department of Biomedical Sciences, Creighton University, Omaha, Nebraska, USA.
Yuan Chen
Hui Jiang
Yao-Zhong Liu
Feng Pan
Tie-Lin Yang
Zi-Hui Tang
Jennifer A Larsen
Joan M Lappe
Robert R Recker
Hong-Wen Deng
Creighton University · USHunan Normal University · CNUniversity of Missouri–Kansas City · USXi'an Jiaotong University · CN

Funding

Proteome-wide Expression Study of Osteogenic CellsP50AR055081 · NIAMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2007 to 2012
$5.0M
ROBUST AND POWERFUL TEST OF CANDIDATE GENES TO BONE MASSR01AR050496 · NIAMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2004 to 2013
$3.8M
Genomic search for bone mass QTLsR01AG026564 · NIA · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2007 to 2010
$2.3M
CHARACTERIZATION OF DELETERIOUS GENOMIC MUTATIONSR01GM060402 · NIGMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2000 to 2005
$889k
Genetic Basis of Osteoporotic Fractures and Bone MassK01AR002170 · NIAMS · CREIGHTON UNIVERSITY · PI DENG, HONG-WEN · 2001 to 2005
$505k
Proteomics Study of Peripheral Blood Monocytes on OsteroporsisR21AG027110 · NIA · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2006 to 2007
$367k
NIAMS NIH HHS K01 AR002170NIAMS NIH HHS K01 AR02170-01A2NIAMS NIH HHS P50 AR055081NIAMS NIH HHS R01 AR050496NIA NIH HHS R01 AG026564NIA NIH HHS R21 AG027110NIA NIH HHS R21 AG027110-01A1NIGMS NIH HHS R01 GM060402NIGMS NIH HHS R01 GM60402
6 · The paper itself

Abstract

introductionOsteoporosis is characterized by low BMD. Studies have shown that B cells may participate in osteoclastogenesis through expression of osteoclast-related factors, such as RANKL, transforming growth factor beta (TGFB), and osteoprotegerin (OPG). However, the in vivo significance of B cells in human bone metabolism and osteoporosis is still largely unknown, particularly at the systematic gene expression level. MATERIALS AND

methodsIn this study, Affymetrix HG-U133A GeneChip arrays were used to identify genes differentially expressed in B cells between 10 low and 10 high BMD postmenopausal women. Significance of differential expression was tested by t-test and adjusted for multiple testing with the Benjamini and Hochberg (BH) procedure (adjusted p </= 0.05).

resultsTwenty-nine genes were downregulated in the low versus high BMD group. These genes were further analyzed using Ingenuity Pathways Analysis (Ingenuity Systems). A network involving estrogen receptor 1 (ESR1) and mitogen activated protein kinase 3 (MAPK3) was identified. Real-time RT-PCR confirmed differential expression of eight genes, including ESR1, MAPK3, methyl CpG binding protein 2 (MECP2), proline-serine-threonine phosphatase interacting protein 1 (PSTPIP1), Scr-like-adaptor (SLA), serine/threonine kinase 11 (STK11), WNK lysine-deficient protein kinase 1 (WNK1), and zinc finger protein 446 (ZNF446).

conclusionsThis is the first in vivo genome-wide expression study on human B cells in relation to osteoporosis. Our results highlight the significance of B cells in the etiology of osteoporosis and suggest a novel mechanism for postmenopausal osteoporosis (i.e., that downregulation of ESR1 and MAPK3 in B cells regulates secretion of factors, leading to increased osteoclastogenesis or decreased osteoblastogenesis).

Indexed as

Genome, HumanPostmenopauseB-LymphocytesBone DensityEstrogen Receptor alphaFemaleHumansMitogen-Activated Protein Kinase 3OsteoporosisReverse Transcriptase Polymerase Chain ReactionESR1 protein, humanEstrogen Receptor alphaMitogen-Activated Protein Kinase 3

Identifiers

PMID18433299
PMCPMC2674539
OpenAlexW2064016072

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.