Evidence map›Paper›PMID 18432393›Full record

ArticleChromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology2008

Centromere repositioning in the X chromosome of XO/XO mammals, Ryukyu spiny rat.

Tsuyoshi Kobayashi, Fumio Yamada, Takuma Hashimoto, Shintaro Abe, Yoichi Matsuda, Asato Kuroiwa

Abstract read
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In one paragraph

Article in Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. A comparative cytogenetic study ofComparative cytogenetics · 2023
    Article
  3. Turnover of mammal sex chromosomes in theProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Ancestral Y-linked genes were maintained by translocation to the X and Y chromosomes fused to an autosomal pair in the Okinawa spiny rat Tokudaia muenninki.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2016
    Article
  15. Multiple sex chromosomes in the light of female meiotic drive in amniote vertebrates.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2014
    Article
  16. Review
  17. The Y chromosome of the Okinawa spiny rat, Tokudaia muenninki, was rescued through fusion with an autosome.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2012
    Article
  18. Article
  19. Multiple copies of SRY on the large Y chromosome of the Okinawa spiny rat, Tokudaia muenninki.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2010
    Article
  20. Centromere repositioning in cucurbit species: implication of the genomic impact from centromere activation and inactivation.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Tsuyoshi KobayashiLaboratory of Animal Cytogenetics, Graduate School of Science, Hokkaido University, Kita-ku, Sapporo, Japan.
Fumio Yamada
Takuma Hashimoto
Shintaro Abe
Yoichi Matsuda
Asato Kuroiwa
Hokkaido University · JPForestry and Forest Products Research Institute · JPJapan Wildlife Research Center · JPMinistry of the Environment · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two species of Ryukyu spiny rat, Tokudaia osimensis and Tokudaia tokunoshimensis, have an XO/XO sex chromosome constitution with no cytogenetically visible Y chromosome in both sexes. The single X chromosomes of T. osimensis and T. tokunoshimensis are submetacentric and subtelocentric, respectively. It was therefore suggested that a pericentric inversion event occurred in the X chromosome of either species. To identify X chromosome rearrangements that have occurred between the two species, we mapped 22 mouse cDNA clones of the X-linked genes on the chromosomes of the two species by direct R-banding FISH. The gene orders of the X chromosomes were conserved in the two species, whereas the position of the centromere on the X chromosome was different. This result indicates that the rearrangement which occurred in either of the X chromosomes after the two species diverged from a common ancestor involved not pericentric inversion but centromere repositioning.

Indexed as

AnimalsCentromereChromosome MappingChromosomes, MammalianClone CellsCytogenetic AnalysisDNA, ComplementaryFemaleGenes, X-LinkedIn Situ Hybridization, FluorescenceMaleMammalsMiceRatsX ChromosomeDNA, Complementary

Identifiers

PMID18432393
OpenAlexW2061311922

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.