Evidence map›Paper›PMID 18431485›Full record

ArticlePloS one2008

Genetic determination and linkage mapping of Plasmodium falciparum malaria related traits in Senegal.

Anavaj Sakuntabhai, Rokhaya Ndiaye, Isabelle Casadémont, Chayanon Peerapittayamongkol, Chayanon Peerapittayamonkol, Christophe Rogier, Patricia Tortevoye, Adama Tall, Richard Paul, Chairat Turbpaiboon and 7 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 68 citations in OpenAlex.

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  8. Forward Genetics in Apicomplexa Biology: The Host Side of the Story.Frontiers in cellular and infection microbiology · 2022
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  11. PeerJ · 2018
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  14. Dynamical malaria models reveal how immunity buffers effect of climate variability.Proceedings of the National Academy of Sciences of the United States of America · 2015
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4 · The record

Corrections and comments

  • Erratum issued
    Peerapittayamonkol, Chayanon [corrected to Peerapittayamongkol, Chayanon]
5 · Who and what money

Authors and funding

17 authors at 6 institutions in 2 countries.

Anavaj SakuntabhaiInstitut Pasteur, Unité de Génétique des Maladies Infectieuses et Autoimmunes, Paris, France. anavaj@pasteur.fr
Rokhaya Ndiaye
Isabelle Casadémont
Chayanon Peerapittayamongkol
Chayanon Peerapittayamonkol
Christophe Rogier
Patricia Tortevoye
Adama Tall
Richard Paul
Chairat Turbpaiboon
Waraphon Phimpraphi
Jean-Francois Trape
André Spiegel
Simon Heath
Odile Mercereau-Puijalon
Alioune Dieye
Cécile Julier
Institut Pasteur · FRInstitut Pasteur de Dakar · SNInserm · FRCentre National de la Recherche Scientifique · FRCentre National de Recherche en Génomique Humaine · FRInstitut de Recherche pour le Développement · SN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plasmodium falciparum malaria episodes may vary considerably in their severity and clinical manifestations. There is good evidence that host genetic factors contribute to this variability. To date, most genetic studies aiming at the identification of these genes have used a case/control study design for severe malaria, exploring specific candidate genes. Here, we performed a family-based genetic study of falciparum malaria related phenotypes in two independent longitudinal survey cohorts, as a first step towards the identification of genes and mechanisms involved in the outcome of infection. We studied two Senegalese villages, Dielmo and Ndiop that differ in ethnicity, malaria transmission and endemicity. We performed genome-scan linkage analysis of several malaria-related phenotypes both during clinical attacks and asymptomatic infection. We show evidence for a strong genetic contribution to both the number of clinical falciparum malaria attacks and the asymptomatic parasite density. The asymptomatic parasite density showed linkage to chromosome 5q31 (LOD = 2.26, empirical p = 0.0014, Dielmo), confirming previous findings in other studies. Suggestive linkage values were also obtained at three additional chromosome regions: the number of clinical malaria attacks on chromosome 5p15 (LOD = 2.57, empirical p = 0.001, Dielmo) and 13q13 (LOD = 2.37, empirical p = 0.0014 Dielmo), and the maximum parasite density during asymptomatic infection on chromosome 12q21 (LOD = 3.1, empirical p<10(-4), Ndiop). While regions of linkage show little overlap with genes known to be involved in severe malaria, the four regions appear to overlap with regions linked to asthma or atopy related traits, suggesting that common immune related pathways may be involved.

Indexed as

Chromosome MappingQuantitative Trait, HeritableAnimalsEthnicityFamilyGenome, HumanHumansMalaria, FalciparumPhenotypeRegression AnalysisRural PopulationSenegal

Identifiers

PMID18431485
PMCPMC2295258
OpenAlexW2007374498

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.