Evidence map›Paper›PMID 18427771›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2008

Genetic analysis of opaque2 modifier loci in quality protein maize.

David R Holding, Brenda G Hunter, Taijoon Chung, Bryan C Gibbon, Clark F Ford, Arvind K Bharti, Joachim Messing, Bruce R Hamaker, Brian A Larkins

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 100 citations in OpenAlex.

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  5. Identification of QTLs associated withFrontiers in plant science · 2025
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  11. Final Selection of Quality Protein Popcorn Hybrids.Frontiers in plant science · 2021
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  12. Genetic enhancement of essential amino acids for nutritional enrichment of maize protein quality through marker assisted selection.Physiology and molecular biology of plants : an international journal of functional plant biology · 2020
    Article
  13. The regulation of zein biosynthesis in maize endosperm.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Review
  14. Article
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  16. High frequency DNA rearrangement atCommunications biology · 2019
    Article
  17. Article
  18. Generation and Evaluation of ModifiedFrontiers in plant science · 2018
    Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

David R HoldingDepartment of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA.
Brenda G Hunter
Taijoon Chung
Bryan C Gibbon
Clark F Ford
Arvind K Bharti
Joachim Messing
Bruce R Hamaker
Brian A Larkins
University of Arizona · USRutgers, The State University of New Jersey · USBaylor University · USIowa State University · USPurdue University West Lafayette · USUniversity of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Quality protein maize (QPM) was created by selecting genetic modifiers that convert the starchy endosperm of an opaque2 (o2) mutant to a hard, vitreous phenotype. Genetic analysis has shown that there are multiple, unlinked o2 modifiers (Opm), but their identity and mode of action are unknown. Using two independently developed QPM lines, we mapped several major Opm QTLs to chromosomes 1, 7 and 9. A microarray hybridization performed with RNA obtained from true breeding o2 progeny with vitreous and opaque kernel phenotypes identified a small group of differentially expressed genes, some of which map at or near the Opm QTLs. Several of the genes are associated with ethylene and ABA signaling and suggest a potential linkage of o2 endosperm modification with programmed cell death.

Indexed as

Quantitative Trait LociChromosome SegregationCrosses, GeneticGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantGenetic LinkageGenetic MarkersInbreedingPhysical Chromosome MappingPlant ProteinsZea maysGenetic MarkersPlant Proteins

Identifiers

PMID18427771
OpenAlexW2009597113

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.