Evidence map›Paper›PMID 18420588›Full record

ArticleThe Journal of biological chemistry2008

The role of CDC48 in the retro-translocation of non-ubiquitinated toxin substrates in plant cells.

Richard S Marshall, Nicholas A Jolliffe, Aldo Ceriotti, Christopher J Snowden, J Michael Lord, Lorenzo Frigerio, Lynne M Roberts

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
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  7. The glycan-dependent ERAD machinery degrades topologically diverse misfolded proteins.The Plant journal : for cell and molecular biology · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Richard S MarshallDepartment of Biological Sciences, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom.
Nicholas A Jolliffe
Aldo Ceriotti
Christopher J Snowden
J Michael Lord
Lorenzo Frigerio
Lynne M Roberts
University of Warwick · GBIstituto di Biologia e Biotecnologia Agraria · IT

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

When the catalytic A subunits of the castor bean toxins ricin and Ricinus communis agglutinin (denoted as RTA and RCA A, respectively) are delivered into the endoplasmic reticulum (ER) of tobacco protoplasts, they become substrates for ER-associated protein degradation (ERAD). As such, these orphan polypeptides are retro-translocated to the cytosol, where a significant proportion of each protein is degraded by proteasomes. Here we begin to characterize the ERAD pathway in plant cells, showing that retro-translocation of these lysine-deficient glycoproteins requires the ATPase activity of cytosolic CDC48. Lysine polyubiquitination is not obligatory for this step. We also show that although RCA A is found in a mannose-untrimmed form prior to its retro-translocation, a significant proportion of newly synthesized RTA cycles via the Golgi and becomes modified by downstream glycosylation enzymes. Despite these differences, both proteins are similarly retro-translocated.

Indexed as

Adenosine TriphosphatasesCell Cycle ProteinsCytosolEndoplasmic ReticulumGlycosylationGolgi ApparatusNicotianaPlant LectinsPlant ProteinsProteasome Endopeptidase ComplexProtein Processing, Post-TranslationalProtein TransportProtoplastsRicinUbiquitinationValosin Containing ProteinAdenosine TriphosphatasesCell Cycle ProteinsPlant LectinsPlant ProteinsProteasome Endopeptidase ComplexRicinRicinus communis agglutinin-1Valosin Containing Protein

Identifiers

PMID18420588
PMCPMC3259637
OpenAlexW2047775296

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.