Evidence map›Paper›PMID 18418374›Full record

ArticleClinical pharmacology and therapeutics2008

Pharmacogenetic pathway analysis of irinotecan.

G L Rosner, J C Panetta, F Innocenti, M J Ratain

Open access · greenAbstract read
In one paragraph

Article in Clinical pharmacology and therapeutics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 45 citations in OpenAlex.

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  2. Multicenter, Randomized, Phase III Trial of Neoadjuvant Chemoradiation With Capecitabine and Irinotecan Guided byJournal of clinical oncology : official journal of the American Society of Clinical Oncology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

G L RosnerDepartment of Biostatistics, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA. glrosner@mdanderson.org
J C Panetta
F Innocenti
M J Ratain
University of Chicago · USSt. Jude Children's Research Hospital · USThe University of Texas MD Anderson Cancer Center · US

Funding

Whole GenomeU01GM061393 · NIGMS · UNIVERSITY OF CHICAGO · PI COX, NANCY J, DOLAN, MARY EILEEN · 2000 to 2014
$39.0M
Population Pharmacokinetics/Dynamic: Statistical IssuesR01CA075981 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI MUELLER, PETER · 1998 to 2011
$2.1M
NCI NIH HHS CA075981NCI NIH HHS R01 CA075981NIGMS NIH HHS GM61393NIGMS NIH HHS U01 GM061393
6 · The paper itself

Abstract

Irinotecan, a chemotherapeutic agent against various solid tumors, is a prodrug requiring activation to SN-38. Irinotecan's complex pharmacokinetics potentially allow for many genetic sources of variability. We explored relationships between pharmacokinetic pathways and polymorphisms in genes associated with irinotecan's metabolism and transport. We fitted a seven-compartment pharmacokinetic model with enterohepatic recirculation (EHR) to concentrations of irinotecan and metabolites SN-38, SN-38 glucuronide (SN-38G), and aminopentanoic acid (APC). Principal component analysis (PCA) of patient-specific parameter estimates produced measures interpretable along pathways. Nine principal components provided good characterization of the overall variation. Polymorphisms in genes UGT1A1, UGT1A7, and UGT1A9 had strong associations with a component corresponding to the irinotecan-to-SN-38 pathway and SN-38 recirculation and to a component relating to SN-38-to-SN-38G conversion and elimination of SN-38G. The component characterizing irinotecan's compartments was associated with HNF1alpha and ABCC2 polymorphisms. The exploratory analysis with PCA in this pharmacogenetic analysis was able to identify known associations and may have allowed identification of previously uncharacterized functional polymorphisms.

Indexed as

Models, BiologicalPharmacogeneticsAdultAgedAged, 80 and overAntineoplastic Agents, PhytogenicCamptothecinClinical Trials as TopicEnterohepatic CirculationFemaleGlucuronosyltransferaseHumansIrinotecanMaleMetabolic Clearance RateMiddle AgedABCC2 protein, humanAntineoplastic Agents, PhytogenicCamptothecinGlucuronosyltransferaseIrinotecanMultidrug Resistance-Associated Protein 2ProdrugsUGT1A1 Enzyme

Identifiers

PMID18418374
PMCPMC2759399
OpenAlexW1985722556

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.