Evidence map›Paper›PMID 18417611›Full record

ArticleMolecular biology of the cell2008

Gcn4 is required for the response to peroxide stress in the yeast Saccharomyces cerevisiae.

Claire Mascarenhas, Laura C Edwards-Ingram, Leo Zeef, Daniel Shenton, Mark P Ashe, Chris M Grant

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 107 citations in OpenAlex.

  1. Article
  2. Mot1 regulation of promoter binding by TBP varies with stress and gene expression levels independently of coactivator dependence.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  9. Review: Emerging roles of the signaling network of the protein kinase GCN2 in the plant stress response.Plant science : an international journal of experimental plant biology · 2022
    Review
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  14. Effect of Light andFrontiers in microbiology · 2021
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  17. Expanding Role of Ubiquitin in Translational Control.International journal of molecular sciences · 2020
    Review
  18. Article
  19. Proteomic analysis ofJournal of food science and technology · 2019
    Article
  20. Multiple roles of CTDK-I throughout the cell.Cellular and molecular life sciences : CMLS · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Claire MascarenhasThe University of Manchester, Faculty of Life Sciences, Manchester M13 9PT, United Kingdom.
Laura C Edwards-Ingram
Leo Zeef
Daniel Shenton
Mark P Ashe
Chris M Grant
University of Manchester · GB

Funding

Biotechnology and Biological Sciences Research Council BB/B000028/1Biotechnology and Biological Sciences Research Council BB/E00623X/1
6 · The paper itself

Abstract

An oxidative stress occurs when reactive oxygen species overwhelm the cellular antioxidant defenses. We have examined the regulation of protein synthesis in Saccharomyces cerevisiae in response to oxidative stress induced by exposure to hydroperoxides (hydrogen peroxide, and cumene hydroperoxide), a thiol oxidant (diamide), and a heavy metal (cadmium). Examination of translational activity indicates that these oxidants inhibit translation at the initiation and postinitiation phases. Inhibition of translation initiation in response to hydroperoxides is entirely dependent on phosphorylation of the alpha subunit of eukaryotic initiation factor (eIF)2 by the Gcn2 kinase. Activation of Gcn2 is mediated by uncharged tRNA because mutation of its HisRS domain abolishes regulation in response to hydroperoxides. Furthermore, Gcn4 is translationally up-regulated in response to H(2)O(2), and it is required for hydroperoxide resistance. We used transcriptional profiling to identify a wide range of genes that mediate this response as part of the Gcn4-dependent H(2)O(2)-regulon. In contrast to hydroperoxides, regulation of translation initiation in response to cadmium and diamide depends on both Gcn2 and the eIF4E binding protein Eap1. Thus, the response to oxidative stress is mediated by oxidant-specific regulation of translation initiation, and we suggest that this is an important mechanism underlying the ability of cells to adapt to different oxidants.

Indexed as

Gene Expression Regulation, FungalBasic-Leucine Zipper Transcription FactorsDNA-Binding ProteinsHydrogen PeroxideMutationOligonucleotide Array Sequence AnalysisOxidantsOxidative StressPeptide Initiation FactorsPeroxidesPhosphorylationPlasmidsProtein Serine-Threonine KinasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsBasic-Leucine Zipper Transcription FactorsDNA-Binding ProteinseIF4E-associated protein Eap1GCN2 protein, S cerevisiaeGCN4 protein, S cerevisiaeHydrogen PeroxideOxidantsPeptide Initiation FactorsPeroxidesProtein Serine-Threonine KinasesSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID18417611
PMCPMC2441660
OpenAlexW2115897170

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.