Evidence map›Paper›PMID 18417534›Full record

ArticleNucleic acids research2008

Structural analysis of the Sulfolobus solfataricus MCM protein N-terminal domain.

Wei Liu, Biagio Pucci, Mosè Rossi, Francesca M Pisani, Rudolf Ladenstein

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 76 citations in OpenAlex.

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  11. Mechanisms and regulation of DNA replication initiation in eukaryotes.Critical reviews in biochemistry and molecular biology · 2017
    Review
  12. Structure of a double hexamer of the Pyrococcus furiosus minichromosome maintenance protein N-terminal domain.Acta crystallographica. Section F, Structural biology communications · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Wei LiuCenter of Structural Biochemistry, Karolinska Institutet NOVUM, 141 57 Huddinge, Sweden. wei.liu@ki.se
Biagio Pucci
Mosè Rossi
Francesca M Pisani
Rudolf Ladenstein
Karolinska Institutet · SE

Funding

Medical Research Council G0500367
6 · The paper itself

Abstract

The Mini-Chromosome Maintenance (MCM) proteins are candidates of replicative DNA helicase in eukarya and archaea. Here we report a 2.8 A crystal structure of the N-terminal domain (residues 1-268) of the Sulfolobus solfataricus MCM (Sso MCM) protein. The structure reveals single-hexameric ring-like architecture, at variance from the protein of Methanothermobacter thermoautotrophicus (Mth). Moreover, the central channel in Sso MCM seems significantly narrower than the Mth counterpart, which appears to more favorably accommodate single-stranded DNA than double-stranded DNA, as supported by DNA-binding assays. Structural analysis also highlights the essential role played by the zinc-binding domain in the interaction with nucleic acids and allows us to speculate that the Sso MCM N-ter domain may function as a molecular clamp to grasp the single-stranded DNA passing through the central channel. On this basis possible DNA unwinding mechanisms are discussed.

Indexed as

Amino Acid SequenceArchaeal ProteinsBacterial ProteinsBinding SitesCrystallography, X-RayDNA-Binding ProteinsDNA HelicasesMethanobacteriaceaeModels, MolecularMolecular Sequence DataProtein Structure, SecondaryProtein Structure, TertiaryProtein SubunitsSequence DeletionStructural Homology, ProteinSulfolobus solfataricusArchaeal ProteinsBacterial ProteinsDNA-Binding ProteinsDNA HelicasesProtein SubunitsZinc

Identifiers

PMID18417534
PMCPMC2425480
OpenAlexW1966126622

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.