ArticleFunctional & integrative genomics2008
Expression patterns in soybean resistant to Phakopsora pachyrhizi reveal the importance of peroxidases and lipoxygenases.
Article in Functional & integrative genomics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
19 citing papers in PubMed, 51 citations in OpenAlex.
- Secondary Metabolites ofPlants (Basel, Switzerland) · 2021Article
- Transcriptional profile of genes involved in the production of terpenes and glyceollins in response to biotic stresses in soybean.Genetics and molecular biology · 2020Article
- Soybean Stem Canker Caused byFrontiers in plant science · 2019Article
- Genomics of Plant Disease Resistance in Legumes.Frontiers in plant science · 2019Review
- Insight into Genes Regulating Postharvest Aflatoxin Contamination of Tetraploid Peanut from Transcriptional Profiling.Genetics · 2018Article
- Article
- Massive analysis of cDNA ends (MACE) reveals a co-segregating candidate gene for LpPg1 stem rust resistance in perennial ryegrass (Lolium perenne).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016Article
- Fighting Asian Soybean Rust.Frontiers in plant science · 2016Review
- Article
- Activation of intervertebral disc cells by co-culture with notochordal cells, conditioned medium and hypoxia.BMC musculoskeletal disorders · 2014Article
- Genome-wide annotation of the soybean WRKY family and functional characterization of genes involved in response to Phakopsora pachyrhizi infection.BMC plant biology · 2014Article
- Identification of the soybean HyPRP family and specific gene response to Asian soybean rust disease.Genetics and molecular biology · 2013Article
- Effect of Fusarium virguliforme phytotoxin on soybean gene expression suggests a role in multidimensional defence.Molecular plant pathology · 2013Article
- Ubiquitous urease affects soybean susceptibility to fungi.Plant molecular biology · 2012Article
- Biphasic gene expression changes elicited by Phakopsora pachyrhizi in soybean correlate with fungal penetration and haustoria formation.Plant physiology · 2011Article
- Identification of novel soybean microRNAs involved in abiotic and biotic stresses.BMC genomics · 2011Article
- Article
- Transcriptome analysis of resistant and susceptible genotypes of Glycine tomentella during Phakopsora pachyrhizi infection reveals novel rust resistance genes.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2010Article
- Phakopsora pachyrhizi, the causal agent of Asian soybean rust.Molecular plant pathology · 2010Review
Corrections and comments
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Authors and funding
5 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Soybean rust caused by Phakopsora pachyrhizi Sydow is a devastating foliar disease that has spread to most soybean growing regions throughout the world, including the USA. Four independent rust resistance genes, Rpp1-Rpp4, have been identified in soybean that recognize specific isolates of P. pachyrhizi. A suppressive subtraction hybridization (SSH) complementary DNA (cDNA) library was constructed from the soybean accession PI200492, which contains Rpp1, after inoculation with two different isolates of P. pachyrhizi that result in susceptible or immune reactions. Both forward and reverse SSH were performed using cDNA from messenger RNA pooled from 1, 6, 12, 24, and 48 h post-inoculation. A total of 1,728 SSH clones were sequenced and compared to sequences in GenBank for similarity. Microarray analyses were conducted on a custom 7883 soybean-cDNA clone array encompassing all of the soybean-rust SSH clones and expressed sequence tags from four other soybean cDNA libraries. Results of the microarray revealed 558 cDNA clones differentially expressed in the immune reaction. The majority of the upregulated cDNA clones fell into the functional category of defense. In particular, cDNA clones with similarity to peroxidases and lipoxygenases were prevalent. Downregulated cDNA clones included those with similarity to cell-wall-associated protein, such as extensins, proline-rich proteins, and xyloglucan endotransglycosylases.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.