Evidence map›Paper›PMID 18413325›Full record

ArticleHuman molecular genetics2008

Variation in WNT genes is associated with non-syndromic cleft lip with or without cleft palate.

Brett T Chiquet, Susan H Blanton, Amber Burt, Deqiong Ma, Samuel Stal, John B Mulliken, Jacqueline T Hecht

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed, 1 pooled it
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 1 synthesis or guideline pooled it, 176 citations in OpenAlex.

  1. Association of theBioscience reports · 2018
    Pooled it
  2. Trial
  3. Article
  4. Article
  5. Article
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  7. Single-Nucleotide Polymorphisms inDiagnostics (Basel, Switzerland) · 2024
    Article
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  9. Review
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  11. Article
  12. Article
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  18. [Association study between haplotypes of WNT signaling pathway genes and nonsyndromic oral clefts among Chinese Han populations].Beijing da xue xue bao. Yi xue ban = Journal of Peking University. Health sciences · 2022
    Article
  19. Article
  20. Article

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Brett T ChiquetUniversity of Texas Medical School, Houston, TX 77030, USA.
Susan H Blanton
Amber Burt
Deqiong Ma
Samuel Stal
John B Mulliken
Jacqueline T Hecht
University of Miami · USBoston Children's Hospital · USTexas Children's Hospital · US

Funding

MOLECULAR STUDIES IN NONSYNDROMIC CLEFT LIP AND PALATER01DE011931 · NIDCR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI BLANTON, SUSAN HALLORAN, HECHT, JACQUELINE T · 1999 to 2017
$7.6M
UT-H Comprehensive Research Training ProgramT32DE015355 · NIDCR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI STANCEL, GEORGE M. · 2003 to 2007
$3.2M
NIDCR NIH HHS 5 R01-DE011931NIDCR NIH HHS 5T32DE015355-05NIDCR NIH HHS R01 DE011931
6 · The paper itself

Abstract

Non-syndromic cleft lip with or without cleft palate (NSCLP) is a common birth defect. Genetic and environmental factors have been causally implicated and studies have begun to delineate genetic contributions. The Wnt genes are involved in regulating mid-face development and upper lip fusion and are therefore strong candidates for an etiological role in NSCLP. Furthermore, the clf1 region in A/WyN clefting susceptible mice contains the Wnt3 and Wnt9B genes. To assess the role of the Wnt family of genes in NSCLP, we interrogated seven Wnt genes (Wnt3, Wnt3A, Wnt5A, Wnt7A, Wnt8A, Wnt9B and Wnt11) in our well-defined NSCLP dataset. Thirty-eight single nucleotide polymorphisms were genotyped in 132 multiplex NSCLP families and 354 simplex parent-child trios. In the entire dataset, single-nucleotide polymorphisms (SNPs) in three genes, Wnt3A (P = 0.006), Wnt 5A (P = 0.002) and Wnt11 (P = 0.0001) were significantly associated with NSCLP after correction for multiple testing. When stratified by ethnicity, the strongest associations were found for SNPs in Wnt3A (P = 0.0007), Wnt11 (P = 0.0012) and Wnt8A (P = 0.0013). Multiple haplotypes in Wnt genes were associated with NSCLP, and gene-gene interactions were observed between Wnt3A and both Wnt3 and Wnt5A (P = 0.004 and P = 0.039, respectively). This data suggests that alteration in Wnt gene function may perturb formation and/or fusion of the facial processes and predispose to NSCLP.

Indexed as

Genetic VariationCleft LipCleft PalateEthnicityFemaleGenetic LinkageGenetic Predisposition to DiseaseHumansMaleMultigene FamilyPhenotypePolymorphism, Single NucleotideWnt ProteinsWnt Proteins

Identifiers

PMID18413325
PMCPMC2852032
OpenAlexW2168348494

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.