Evidence map›Paper›PMID 18410726›Full record

ArticleDevelopmental cell2008

Epigenetic blocking of an enhancer region controls irradiation-induced proapoptotic gene expression in Drosophila embryos.

Yanping Zhang, Nianwei Lin, Pamela M Carroll, Gina Chan, Bo Guan, Hong Xiao, Bing Yao, Samuel S Wu, Lei Zhou

Abstract read
In one paragraph

Article in Developmental cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Regulation and coordination of the different DNA damage responses inFrontiers in cell and developmental biology · 2022
    Review
  8. Tumor models in various Drosophila tissues.WIREs mechanisms of disease · 2021
    Review
  9. Article
  10. ADisease models & mechanisms · 2020
    Article
  11. Molecular biology of the cell · 2019
    Article
  12. Article
  13. P53 and Apoptosis in the Drosophila Model.Advances in experimental medicine and biology · 2019
    Review
  14. TheG3 (Bethesda, Md.) · 2018
    Article
  15. Article
  16. Article
  17. Cell death regulates muscle fiber number.Developmental biology · 2016
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yanping ZhangDepartment of Molecular Genetics and Microbiology, College of Medicine, University of Florida, Gainesville, FL 32610, USA.
Nianwei Lin
Pamela M Carroll
Gina Chan
Bo Guan
Hong Xiao
Bing Yao
Samuel S Wu
Lei Zhou

Funding

Probing Complexity of UV Induced Apoptosis in DrosophilaR01CA095542 · NCI · UNIVERSITY OF FLORIDA · PI ZHOU, LEI · 2003 to 2007
$1.2M
NCI NIH HHS CA95542NCI NIH HHS R01 CA095542
6 · The paper itself

Abstract

Drosophila embryos are highly sensitive to gamma-ray-induced apoptosis at early but not later, more differentiated stages during development. Two proapoptotic genes, reaper and hid, are upregulated rapidly following irradiation. However, in post-stage-12 embryos, in which most cells have begun differentiation, neither proapoptotic gene can be induced by high doses of irradiation. Our study indicates that the sensitive-to-resistant transition is due to epigenetic blocking of the irradiation-responsive enhancer region (IRER), which is located upstream of reaper but is also required for the induction of hid in response to irradiation. This IRER, but not the transcribed regions of reaper/hid, becomes enriched for trimethylated H3K27/H3K9 and forms a heterochromatin-like structure during the sensitive-to-resistant transition. The functions of histone-modifying enzymes Hdac1(rpd3) and Su(var)3-9 and PcG proteins Su(z)12 and Polycomb are required for this process. Thus, direct epigenetic regulation of two proapoptotic genes controls cellular sensitivity to cytotoxic stimuli.

Indexed as

Drosophila melanogasterEmbryo, NonmammalianEnhancer Elements, GeneticEpigenesis, GeneticAnimalsApoptosisChromatinDeoxyribonuclease IDrosophila ProteinsGamma RaysGene Expression ProfilingHistone DeacetylasesHistone-Lysine N-MethyltransferaseHistonesNeuropeptidesOligonucleotide Array Sequence AnalysisChromatinDeoxyribonuclease IDrosophila ProteinsHID protein, DrosophilaHistone DeacetylasesHistone-Lysine N-MethyltransferaseHistonesNeuropeptidesPc protein, DrosophilaPolycomb Repressive Complex 1Polycomb Repressive Complex 2Repressor Proteinsrpr protein, DrosophilaSu(z)12 protein, Drosophila

Identifiers

PMID18410726
PMCPMC2901920

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.