Evidence map›Paper›PMID 18406332›Full record

ArticleMolecular cell2008

Assembly and channel opening in a bacterial drug efflux machine.

Vassiliy N Bavro, Zbigniew Pietras, Nicholas Furnham, Laura Pérez-Cano, Juan Fernández-Recio, Xue Yuan Pei, Rajeev Misra, Ben Luisi

Abstract read
In one paragraph

Article in Molecular cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed.

  1. Article
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  11. A coevolution experiment betweenMicrobiology (Reading, England) · 2023
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. MexAB-OprM Efflux Pump Interaction with the Peptidoglycan ofInternational journal of molecular sciences · 2021
    Article
  17. Article
  18. Review
  19. Article
  20. Article

32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Vassiliy N BavroDepartment of Biochemistry, University of Cambridge, 80 Tennis Court Road, Cambridge CB2 1GA, UK.
Zbigniew Pietras
Nicholas Furnham
Laura Pérez-Cano
Juan Fernández-Recio
Xue Yuan Pei
Rajeev Misra
Ben Luisi

Funding

Export &Import of Lethal Agents Mediated by TolCR01GM066988 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI MISRA, RAJEEV · 2003 to 2006
$881k
NIGMS NIH HHS R01 GM066988Wellcome Trust
6 · The paper itself

Abstract

Drugs and certain proteins are transported across the membranes of Gram-negative bacteria by energy-activated pumps. The outer membrane component of these pumps is a channel that opens from a sealed resting state during the transport process. We describe two crystal structures of the Escherichia coli outer membrane protein TolC in its partially open state. Opening is accompanied by the exposure of three shallow intraprotomer grooves in the TolC trimer, where our mutagenesis data identify a contact point with the periplasmic component of a drug efflux pump, AcrA. We suggest that the assembly of multidrug efflux pumps is accompanied by induced fit of TolC driven mainly by accommodation of the periplasmic component.

Indexed as

Protein ConformationATP-Binding Cassette, Sub-Family C ProteinsBacterial Outer Membrane ProteinsBiological TransportCrystallography, X-RayDrug Resistance, MicrobialEscherichia coli ProteinsLipoproteinsMembrane Transport ProteinsModels, MolecularMolecular Sequence DataPoint MutationAcrA protein, E coliAcrB protein, E coliATP-Binding Cassette, Sub-Family C ProteinsBacterial Outer Membrane ProteinsEscherichia coli ProteinsLipoproteinsMembrane Transport ProteinstolC protein, E coli

Identifiers

PMID18406332
PMCPMC2292822

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.