Evidence map›Paper›PMID 18406328›Full record

ArticleMolecular cell2008

Differential regulation of the cellular response to DNA double-strand breaks in G1.

Jacqueline H Barlow, Michael Lisby, Rodney Rothstein

Abstract read
In one paragraph

Article in Molecular cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 110 papers.

0numbers the graph read from it
0cells of the map it votes in
110citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

110 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Cancers · 2019
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

50 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Jacqueline H BarlowDepartment of Genetics and Development, Columbia University Medical Center, 701 West 168th Street, New York, NY 10032-2704, USA.
Michael Lisby
Rodney Rothstein

Funding

PREDOCTORAL TRAINING GRANT IN HUMAN GENETICS &DEVELOPMET32GM007088 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI SHEN, MICHAEL M. · 1985 to 2020
$7.1M
Mechanism of spontaneous and DSB-induced repairR37GM050237 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ROTHSTEIN, RODNEY J. · 2005 to 2014
$6.0M
Genetics of the formation of repair &reombination fociR01GM067055 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ROTHSTEIN, RODNEY J. · 2003 to 2014
$4.3M
MECHANISM OF SPONTANEOUS AND DSB-INDUCED REPAIRR01GM050237 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI ROTHSTEIN, RODNEY J. · 1993 to 2016
$3.0M
SKN-1 functions in C elegans oxidative stress responsesF32GM070088 · NIGMS · JOSLIN DIABETES CENTER · PI GARVIN, RIVA O · 2005 to 2006
$113k
Regulation of Double Strand Break RepairF31GM073568 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BARLOW, JACQUELINE · 2004 to 2007
$98k
NIGMS NIH HHS F31 GM073568NIGMS NIH HHS F32 GM070088NIGMS NIH HHS GM50237NIGMS NIH HHS GM67055NIGMS NIH HHS GM70088NIGMS NIH HHS GM73568NIGMS NIH HHS R01 GM050237NIGMS NIH HHS R01 GM067055NIGMS NIH HHS R37 GM050237NIGMS NIH HHS T32 GM007088
6 · The paper itself

Abstract

Double-strand breaks (DSBs) are potentially lethal DNA lesions that can be repaired by either homologous recombination (HR) or nonhomologous end-joining (NHEJ). We show that DSBs induced by ionizing radiation (IR) are efficiently processed for HR and bound by Rfa1 during G1, while endonuclease-induced breaks are recognized by Rfa1 only after the cell enters S phase. This difference is dependent on the DNA end-binding Yku70/Yku80 complex. Cell-cycle regulation is also observed in the DNA damage checkpoint response. Specifically, the 9-1-1 complex is required in G1 cells to recruit the Ddc2 checkpoint protein to damaged DNA, while, upon entry into S phase, the cyclin-dependent kinase Cdc28 and the 9-1-1 complex both serve to recruit Ddc2 to foci. Together, these results demonstrate that the DNA repair machinery distinguishes between different types of damage in G1, which translates into different modes of checkpoint activation in G1 and S/G2 cells.

Indexed as

DNADNA Breaks, Double-StrandedDNA DamageDNA RepairAdaptor Proteins, Signal TransducingCDC28 Protein Kinase, S cerevisiaeCell Cycle ProteinsDeoxyribonucleases, Type II Site-SpecificDNA-Binding ProteinsEndodeoxyribonucleasesEndonucleasesExodeoxyribonucleasesG1 PhaseGenes, cdcHumansPhosphoproteinsAdaptor Proteins, Signal TransducingCDC28 Protein Kinase, S cerevisiaeCell Cycle ProteinsDdc1 protein, S cerevisiaeDeoxyribonucleases, Type II Site-SpecificDNADNA-Binding ProteinsEndodeoxyribonucleasesEndonucleasesExodeoxyribonucleasesLCD1 protein, S cerevisiaeMEC3 protein, S cerevisiaeMRE11 protein, S cerevisiaePhosphoproteinsRecombinant Fusion ProteinsReplication Protein ARFA1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSAE2 protein, S cerevisiaeSCEI protein, S cerevisiaeTranscription FactorsYKU70 protein, S cerevisiae

Identifiers

PMID18406328
PMCPMC2440653

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.