Evidence map›Paper›PMID 18403594›Full record

ArticleThe American journal of pathology2008

Molecular characterization of human breast tumor vascular cells.

Rajendra Bhati, Cam Patterson, Chad A Livasy, Cheng Fan, David Ketelsen, Zhiyuan Hu, Evangeline Reynolds, Catherine Tanner, Dominic T Moore, Franco Gabrielli and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The American journal of pathology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 120 citations in OpenAlex.

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  16. Molecular Ultrasound Imaging.Nanomaterials (Basel, Switzerland) · 2020
    Review
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11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Rajendra BhatiDepartment of Surgery, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Cam Patterson
Chad A Livasy
Cheng Fan
David Ketelsen
Zhiyuan Hu
Evangeline Reynolds
Catherine Tanner
Dominic T Moore
Franco Gabrielli
Charles M Perou
Nancy Klauber-DeMore
University of North Carolina at Chapel Hill · USUniversity of Pisa · IT

Funding

Tissue Procurement & PathologyP50CA058223 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CHARLES M PEROU · 1992 to 2026
$59.3M
TRAINING PROGRAM FOR MEDICAL SCIENTISTST32GM008716 · NIGMS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI DEMORE, NANCY · 1999 to 2024
$9.3M
Surgical Oncology Research Training ProgramT32CA009688 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BALDWIN, ALBERT SIDNEY · 1992 to 2012
$1.4M
Genetic Regulation of Human Breast Cancer DormancyK08CA098034 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DEMORE, NANCY · 2004 to 2008
$652k
NCI NIH HHS 1 K08 CA098034-01A2NCI NIH HHS CA009688NCI NIH HHS K08 CA098034NCI NIH HHS P50 CA058223NCI NIH HHS P50-CA58223NCI NIH HHS T32 CA009688NIGMS NIH HHS T32 GM008716
6 · The paper itself

Abstract

A detailed understanding of the assortment of genes that are expressed in breast tumor vessels is needed to facilitate the development of novel, molecularly targeted anti-angiogenic agents for breast cancer therapies. Rapid immunohistochemistry using factor VIII-related antibodies was performed on sections of frozen human luminal-A breast tumors (n = 5) and normal breast (n = 5), followed by laser capture microdissection of vascular cells. RNA was extracted and amplified, and fluorescently labeled cDNA was synthesized and hybridized to 44,000-element long-oligonucleotide DNA microarrays. Statistical analysis of microarray was used to compare differences in gene expression between tumor and normal vascular cells, and Expression Analysis Systematic Explorer was used to determine enrichment of gene ontology categories. Protein expression of select genes was confirmed using immunohistochemistry. Of the 1176 genes that were differentially expressed between tumor and normal vascular cells, 55 had a greater than fourfold increase in expression level. The extracellular matrix gene ontology category was increased while the ribosome gene ontology category was decreased. Fibroblast activation protein, secreted frizzled-related protein 2, Janus kinase 3, and neutral sphingomyelinase 2 proteins localized to breast tumor endothelium as assessed by immunohistochemistry, showing significantly greater staining compared with normal tissue. These tumor endothelial marker proteins also exhibited increased expression in breast tumor vessels compared with that in normal tissues. Therefore, these genetic markers may serve as potential targets for the development of angiogenesis inhibitors.

Indexed as

Gene Expression Regulation, NeoplasticBreast NeoplasmsFemaleGene Expression ProfilingHumansMicrodissectionOligonucleotide Array Sequence Analysis

Identifiers

PMID18403594
PMCPMC2329846
OpenAlexW2048951978

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.